Carya illinoinensis (pecan): 122294843
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Entry
122294843 CDS
T08745
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF2-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122294843
04121 Ubiquitin system [BR:
cill04121
]
122294843
Enzymes [BR:
cill01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122294843
Membrane trafficking [BR:
cill04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
122294843
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122294843
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
Rad50_zn_hook
zf-C3HC4_3
zf-RING-like
zf-ANAPC11
zf-RING_5
zf-RING_16
Zn_ribbon_GTF2H2
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
122294843
NCBI-ProteinID:
XP_042959769
LinkDB
All DBs
Position
14
Genome browser
AA seq
371 aa
AA seq
DB search
MSSPATSYWCYRCTRFIRMWAQENTITCPHCDGGFIEEIDASPSSDNPHPRLAASAMHLF
GNNAQDSEHAPALVSRRNRRSPGNRSPFNPVIVLRGVSADPVGDGDGERNSFELYYDDGA
GSGLRPLPATMSEFLMGSGFERLLEQLAQLEVTGLGRPENPPASKAAIESLPTIEIVDSH
VGSESHCAVCKEAFELGVEAREMPCKHIYHSDCIIPWLSLRNSCPVCRHELPSERNEGEN
SEEDTVGLTIWRLPGGGFAVGRFSGGRRAAAERELPVVYTEMDGGLGAGGAPRRVSWASR
SGGRESGGFRRAFRNFFSFLRSRPDSSSSAHSGSESRSMSRSRSHSGSVFNRYVRRRNNA
WVLGDQSGNGR
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgcctgcaacgtcttattggtgttacagatgcacgcgcttcattcgcatgtgg
gcccaagaaaataccatcacctgcccccactgcgatggagggttcatcgaggagatcgac
gcctctccttcgtcggataatcctcaccctcggttggcagcctccgccatgcacttgttt
ggaaacaacgctcaagattctgagcacgcacccgccctggtgtctcgccggaaccgccgt
agccccggaaaccggtcgcctttcaacccggttatcgtcctacgcggagtatcggcagac
cccgtaggcgacggtgatggagagaggaacagcttcgagttgtattacgacgacggagct
gggtccgggcttcgtccactgccggcgaccatgtcagagttcttgatgggttcgggtttc
gaacgtttgctggagcagctggcccagctcgaagtgaccgggctcggccgtcccgagaat
ccgcccgcatctaaggccgcgatagagtctctaccgacgatcgaaatcgtggacagccac
gtcggctccgagtcccactgcgcggtctgcaaggaagccttcgagctcggcgtggaggcc
cgcgagatgccgtgcaagcacatataccactcagactgcatcatcccatggctttctcta
cgaaactcgtgcccggtttgccggcacgagttaccgagcgagcgaaacgagggcgagaat
tcggaagaagacacggtagggttgaccatatggaggctaccgggaggtgggtttgctgtg
gggaggttctctggggggagaagagcagctgcggagagagaactaccggttgtgtacacg
gaaatggatggtgggcttggtgctggtggggctccgagaagggtttcgtgggcttcaagg
agtggggggagggagagtggtgggttccgcagggctttccggaatttcttctccttcttg
aggtcgaggcctgattcttcttcgtctgcgcactctgggtctgaatctcggtctatgagc
agaagtcggagtcattcgggttcggtgttcaataggtacgtgcgaaggcggaacaacgct
tgggttttgggggatcagagtgggaatgggaggtga
DBGET
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