Carya illinoinensis (pecan): 122295374
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Entry
122295374 CDS
T08745
Name
(RefSeq) nuclear poly(A) polymerase 1-like isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122295374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122295374
Enzymes [BR:
cill01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
122295374
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
122295374
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Motif
Other DBs
NCBI-GeneID:
122295374
NCBI-ProteinID:
XP_042960313
LinkDB
All DBs
Position
15
Genome browser
AA seq
764 aa
AA seq
DB search
MGSPGLMNRNNGQRLGITEPISLGGPTEYDVIKTRELEKYLQDAGLYENQAEAVSREEVL
GRLDQIVKIWVKTISRSKGLNDQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHAT
REDDFFGELYRMLFDMPEVTELHPVPDAHVPVMGFKFSGVSIDLLYAKLSLWVIPEDLDI
SQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRLWAKCRGVYSNVSGFL
GGINWALLVARICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCAIKEGSLGLQAWDPRR
NPKDRFHLMPIITPAYPCMNSSYNVSSSTLRIMSEEFQRGCDICEAMEISKADWDTLFET
YPFFEAYKNYLQIDVTAESADDLRKWKGWVESRLRQLTLKIERHTYNKLQCHPHPGGFSD
RSRAFHCCYFMGLRRKQGVPVNEGEQFDITLTVEEFKQNVNMYSLWKHGMEIRVSHVKRR
NIPNFVFPGGIRPSSPSKVTWDSRRSVELKVSGRAQDSGEGKIVSNGSDNERKRARVDDS
FETNLGNAKRLALPPSIGEVHQGSPPLSTVSASSIKGDDVDMHRLEESWGEKYENNIPDS
LRNVKNLVEVSSQNVEANGSVECNPHNKTQAAATVDSTSSGEAEKLAIEKITSGPYLSHQ
AYSEELDELENDFEYGDQDKGIKGNIKGGPVESSSANAAVAVQVTSSNGSTSSGGLYSNG
NLEELEPTELVAPLSNVTPAPVIHSKPLIRLSFTSLPKATGKTS
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgggaagccctggattgatgaatcgcaataatgggcaaaggttaggcatcacagaacca
atttcattgggtggaccgactgaatatgatgtgatcaagacccgggaactcgaaaagtat
ttgcaagacgctggattgtatgagaatcaggcagaggctgtgagtagggaagaagtgctt
ggaaggcttgaccagattgtaaagatttgggtcaaaacaattagtcgatcgaaggggttg
aatgaccaactcgtgcaagaagcaaacgccaagattttcacatttggttcctatcggcta
ggagtgcatggccctggtgcagatattgacacactttgtgtgggacctagacacgctaca
agagaagatgatttctttggcgagctatatagaatgctgtttgatatgccagaagtaaca
gagttgcaccccgtgcctgatgctcatgttccggtcatgggatttaagttcagtggagtt
tccatagaccttctgtacgcaaaactgtcactctgggttattcctgaagacctggatata
tcgcaggactcaatactacagaatgcagatgaacagacagttcgtagtctcaatggctgt
agagtcactgaccaaattttgcgtttggttccaaatattcagaatttccgcacaactttg
aggtgcatgaggttgtgggcaaaatgtcgtggtgtttactccaatgtttcaggatttctt
ggcggtataaactgggcattgctggttgctcgcatatgccaactatatcccaatgcactg
ccgaatatgttagtttctcgattctttagggtctatactcagtggcgttggccaaatcca
gtaatgctctgtgccattaaagaaggatctcttggacttcaagcttgggatcctagaaga
aatcctaaagacaggttccatttgatgcctataataactcctgcttacccttgcatgaat
tctagctacaatgtgtcgtcgagtactttgcgtattatgtcggaggagtttcagaggggt
tgtgatatttgtgaggctatggagataagcaaggctgattgggatacactttttgagacc
tatccattcttcgaagcatataagaattacctacaaatagacgttactgcagaaagtgct
gatgatctaagaaaatggaaaggctgggttgagtctcgcctccgccagctaacattgaag
attgagaggcatacttataacaagcttcagtgccatccacacccagggggtttttcagac
aggtctagagctttccattgttgctacttcatgggtttgcggcgaaaacaaggagttcca
gtgaacgaaggtgaacaatttgatataacgttaaccgttgaggaatttaaacaaaatgtg
aacatgtactcattgtggaagcatggaatggagatccgtgtatctcatgtaaaacgcagg
aatatacccaactttgtatttcctggtgggatccgaccctctagcccatctaaagtaact
tgggacagtaggaggagtgtagaactgaaagtttctggacgtgctcaagattctggtgaa
ggtaaaatagtttcaaatggatcagataatgaaaggaagagagcgcgtgtggatgatagt
tttgagactaacctgggaaacgccaagcgcttagctttgccaccatctattggggaagtt
caccagggtagccctcctttgagcactgttagcgcatcttccattaaaggtgatgatgtg
gatatgcacaggttggaggaatcctggggagagaaatatgagaataatataccagacagc
ttgagaaatgtgaaaaatctagtggaggtttcttctcaaaatgttgaagctaatggatca
gtggaatgcaatccacacaacaaaactcaagctgctgctactgtggattcaacaagctct
ggagaagcagagaagctggcaattgagaagataacgtctggtccatatctatcccatcaa
gcttattcagaagaacttgatgagcttgaaaatgattttgaatatggagatcaagataaa
ggtattaagggaaacatcaaaggtggtcctgtggagtcttcgtcagcaaatgcagcagta
gcggtgcaagtaacctctagcaatggatccacttcttctggtggtttatattccaatggg
aacttagaagagcttgagcccactgaacttgtggcgccattgtcaaatgtgactcctgca
cctgtgatacattcgaagccactaatcaggctgagtttcacttccttaccaaaagctacc
ggcaaaacctcatga
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