Carya illinoinensis (pecan): 122295506
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Entry
122295506 CDS
T08745
Name
(RefSeq) chloride channel protein CLC-c-like isoform X1
KO
K05016
chloride channel 7
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cill01009
]
122295506
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122295506
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cill04040
]
122295506
Protein phosphatases and associated proteins [BR:
cill01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122295506
Membrane trafficking [BR:
cill04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
122295506
Ion channels [BR:
cill04040
]
Chloride channels
Chloride channel (CLC)
122295506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
122295506
NCBI-ProteinID:
XP_042960475
LinkDB
All DBs
Position
15:complement(46789050..46811620)
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AA seq
786 aa
AA seq
DB search
MDRENMDQENNVNRIDDVDDIENEGLLDGKGIDRYWSEVSDKNMTYTEPLLVKRTNTTSQ
IAIVGANVCPIESLDYEIIENELFKQDWRSRKKVQIFQYVLLKWAFALLIGLGTGLVGFF
NNIAVENISGFKLLLTSDLMSKHKYFKAFAAYAGCNVVLAVAAAALCAFIAPAAAGSGIP
EVKAYLNGIDAYSILAPSTLFVKIFGSILGVSAGFVVGKEGPMVHTGACIANLLGQGGSR
KYHLTWSWLRYFKNDRDRRDMITCGAAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRT
FFTTAVVAIVLRAFIQYCNTGKCGLFGEGGLIMYDVSSAKATYSGSDILAVIFLGTIGGI
LGSIYNYFVDKVLRTYSIINERGAAYKILLVIIISSLTSCCSFGLPWFAKCIACPTDLTV
SCPTVGDSGNYKSFQCSSGYYNDLASLFLNTNDDAIRNLFSTSTTKEFHISSLFIFFGAV
YCLGIITYGIAIPSGLFIPVILAGACYGRLVGRLFESMSTLDTGLFALLGAASFLGGTMR
MTVSLCIILLELTNDLQLLPLVMLVLLISKTVADNFNKGVYDQILKIKGLPYMEAHAEPY
MRHLVARDVITGPLVTFYGIEKVGNILHALKTTGHNGFPVIDEPPFSGAPELCGIVLRSH
LLVLLKGKNFSRDRVITGDDILQRFAAFDFAKAGSGKGIKLEDIDIEEEEMEMYVDLHPI
TNSSPYTVVETMSLAKAAILFRQLGLRHMCVVPKSQGRPPIVGILTRHDFMPEHVLGLNP
HVMPDK
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggatcgtgagaatatggatcaagaaaataatgtgaaccgcattgatgatgtggatgac
attgaaaatgagggcctgctggatgggaaggggattgacagatactggtcagaggtatct
gacaaaaatatgacatacacagagccacttttggtgaaaaggaccaacaccacctctcag
attgccattgttggtgccaatgtttgccccattgagagccttgactacgagattattgaa
aatgaattatttaagcaagactggaggtcaaggaagaaggttcaaatatttcagtacgtt
ttactcaagtgggcatttgcacttcttataggcctaggtactggactagttggcttcttc
aataatattgcagttgagaacatatctggtttcaagttgctgctgactagcgatctcatg
tctaagcacaaatatttcaaggctttcgcagcatatgctggttgcaatgtagttctagct
gttgctgcggcagctctttgtgctttcattgctccagcagcagcagggtctggtattcct
gaggtcaaagcctatctcaatggcattgatgcttattcaatactagctccaagcactctt
tttgtaaagatttttggctccattcttggcgtttctgctggcttcgtagttggtaaagaa
gggcctatggtacacacaggtgcttgcattgccaatttacttgggcaagggggttctcgc
aagtaccatttgacttggagttggctaagatacttcaaaaatgatcgggacaggcgagac
atgattacttgtggtgcagctgccggagtggctgctgcctttcgtgctccagttggtggt
gtcctgtttgctctagaagaggcagcttcatggtggcggagcgctcttctttggaggact
tttttcacgacagcagtagttgccatagttctgagagctttcatacaatactgtaacact
ggaaaatgtgggctatttggtgaaggaggtcttataatgtatgatgtcagttctgccaag
gcaacatatagtggctcagatatattagcagtaattttcctaggaactattggaggcatt
cttggaagcatatataactattttgtggacaaggtccttcgtacttatagcatcatcaac
gaaagaggtgctgcttacaagatcttactggttatcatcatctcctccttgacatcatgt
tgttcttttggcttgccatggtttgcaaagtgcatcgcttgccccactgacctaacagtg
agctgtcccactgttggtgactctggaaactataaaagcttccagtgctcatctggatac
tacaatgaccttgcctccctctttctaaacactaatgatgatgctatccgcaacctattc
agcactagtaccacaaaagaatttcatatctccagtcttttcatcttctttggtgctgta
tactgcctgggaattatcacttatggcattgctattccctcgggtctctttatccctgtc
atactagccggagcttgctacggacgtcttgttgggagattgtttgaatcaatgtctaca
cttgacacgggtctctttgcccttcttggagctgcctcctttcttggtggcactatgaga
atgactgtttccctgtgtattatattgcttgagctcaccaatgacttacaattgcttcct
cttgtgatgttggttctcctaatctctaaaacagtggctgataacttcaacaagggtgta
tatgatcaaatactgaaaataaaggggctgccttacatggaggcccatgcagaaccgtac
atgaggcatttggttgcacgtgatgttattactggcccattggtcaccttttatggcatt
gaaaaggtaggaaatatattgcatgctttgaaaacaacagggcataatgggtttcctgtt
atcgatgaaccacctttctcgggggcacctgaattgtgtggaattgttttgaggtctcat
ttgctagttttgctgaaaggaaagaatttttcgagggatagggtgattactggagatgat
atcctgcaaagatttgctgcatttgattttgccaaggcggggtccgggaagggaatcaaa
ctagaggatatagatattgaagaggaagagatggagatgtatgttgatcttcatcctatt
accaattcatccccatacacagtggttgagacaatgtcactagccaaagctgcaattctc
tttcggcaacttggtctcaggcacatgtgtgtagtcccgaagagccaagggaggcctcca
attgttggaattctgactcggcatgacttcatgccagagcacgttttgggactcaatcct
catgtgatgcctgataagtag
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