KEGG   Carya illinoinensis (pecan): 122295636
Entry
122295636         CDS       T08745                                 
Name
(RefSeq) DNA polymerase epsilon subunit B isoform X1
  KO
K02325  DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill03030  DNA replication
cill03410  Base excision repair
cill03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cill00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    122295636
   03410 Base excision repair
    122295636
   03420 Nucleotide excision repair
    122295636
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cill03032]
    122295636
   03400 DNA repair and recombination proteins [BR:cill03400]
    122295636
Enzymes [BR:cill01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     122295636
DNA replication proteins [BR:cill03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    122295636
DNA repair and recombination proteins [BR:cill03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      122295636
SSDB
Motif
Pfam: DNA_pol_E_B Dpoe2NT
Other DBs
NCBI-GeneID: 122295636
NCBI-ProteinID: XP_042960648
LinkDB
Position
15:complement(39346450..39351799)
AA seq 543 aa
MNSSTIRKKVERKCKIRGYTLKVEALDEILSFVNRFQGAQDDALDLLLDQLEHESLKSSI
IDKDPVHRVVSLLLEAEAAAEDGPDIDGVTGGSSASSIRVIDAFLVPKFRYDPIKKTFYE
HTGGLPIHGEASAKAALYKDRFLLLFQRIARDQHFSKPAFDTEMSHFGSCEISPIQSLVG
QTGRRWVMGVISQLEDGHFYLEDLTASVEINLSNAKITTGFFLENTIVVAEGEMVLEGVF
QVITCGFPPLEDRDKSSKLLAGHDFFGGGILTKEETLRLAELEKRAINDMFVILSDIWLD
NEEVMGKLEIVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRSQFAKLGQLIGAH
PRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKHIPNAIFSSNPCRLTFLITDE
VEIKFYTQEIVFFRQDLLYRMRRSCLMAPSTEETTDPFQHLVATITHQSHLCPLPLTVQP
ILWNYDHCLYLYPTPHAIILGDRSEQKAFKYTGITCFNPGSFSNDYTFVAYRPSTQEVEL
SAL
NT seq 1632 nt   +upstreamnt  +downstreamnt
atgaacagttcgacgataaggaagaaggtggagaggaaatgcaagataagggggtacact
ctgaaagtggaggctctggatgagatcctttccttcgtcaaccgtttccaaggcgcccag
gacgacgccctcgaccttctcctcgaccagcttgagcacgaatctctgaaatcttctata
atagataaggacccggttcaccgagtggttagccttctgctggaggctgaagccgctgca
gaggacggtccagatattgacggcgttaccggtggatcttcggcgtcatctatacgcgta
attgatgccttcttggtccccaaattccgatacgatcccatcaagaagactttctacgag
catacggggggcctacctatacatggagaggcctctgctaaggcggcgttgtacaaggac
aggttcctcttgctgttccagaggattgctcgcgaccagcatttctccaaacccgcattt
gatacggaaatgtcacattttggaagctgtgagatatcaccaattcagtctctagttggc
caaacggggagaagatgggtcatgggtgtcatatcgcagttggaggatggccatttttac
ttggaagacctaactgcttccgtcgaaatcaatttatctaatgcaaagataactacaggt
tttttcttggagaataccatagttgtagcagaaggtgagatggtcttagagggcgtattt
caggtcattacgtgtggatttcctccattggaggaccgagataagtcgtccaaattactt
gcaggacatgacttctttggcggtggaatactaacaaaagaggagactctcagacttgca
gagttggaaaagagagcaattaatgacatgtttgtcattctgtctgacatttggcttgac
aatgaagaggttatgggaaaactagagattgtccttgacggttttgagagtgtggaggtg
gttccttccttatttgtattcatgggcaatttttgttctcacccatgcaacctttccttc
cattctttctcaagtctcagatcacagttcgccaagctagggcaattgattggagctcat
ccacggctgaaagaacatagtcggtttctgtttattccaggccctgatgatgcaggtcca
tcaacagttctacccaggtgtgctttacccaagtatttaactgaagagcttcagaagcac
attccaaatgcaatattttctagcaatccttgcaggttaaccttcctgatcactgatgaa
gttgaaatcaaattctatacccaagaaattgtatttttccgccaggatctgctgtataga
atgcgtcgctcatgtctaatggccccttctacggaagaaaccaccgatccttttcagcat
cttgttgctaccataactcatcaaagtcatctctgtccgctccctcttactgtacaacct
attctctggaactacgaccactgtctttatctttatccgactcctcatgcgatcatttta
ggggacaggagtgagcaaaaggcattcaaatacacaggaatcacttgttttaatcccggt
tccttctcaaatgactacacctttgtggcatatcgtccttccactcaggaagttgaattg
tcagccctatag

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