Carya illinoinensis (pecan): 122295720
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Entry
122295720 CDS
T08745
Name
(RefSeq) RNA polymerase I-specific transcription initiation factor RRN3
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cill03021
]
122295720
Transcription machinery [BR:
cill03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
122295720
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRN3
Motif
Other DBs
NCBI-GeneID:
122295720
NCBI-ProteinID:
XP_042960755
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Position
15:44362540..44372189
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AA seq
600 aa
AA seq
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MGAEELASYGAGFHEMDNDDNFSDSEVVYHVKDALNSVSLGDSDSYDQLVGVMHHNERLA
PEEVALLVTSLKALSGAVSYIDVILHDSLLTSIFRMNMWNYRPDVMDALLELIISLAASN
GKHVNSCLEMLVSNFTPPYSFVDTLTQPRGLAKKEQVLSRVHSALKHIADLVPLAPSILS
PIVSQRMPIYAKEPLAVIYVENMLKLESSAIGEFVRSTMLMALMDMLIELDVEIGWDDIL
RDDSSKGIFQMELENVDEIADYDEEDDYELPRELSRKSLGGNLIAEKLDSLMALTFEHLE
SCKANGRLNEVFEPLLDSFRITVLTTYKSKFAQFVMFYVCALDPENCGVRFATMLADIFV
SKDYPLPFRMSAVAYLASFLSRANFLSSPFVAIMLKRLVDWCLEYCKTEGGEINPVSHRL
FYSACQAIMYVLCFRMKSMMDVAWFKSHLLFIEPILKHPLSPLKVCLPSIVDEFCQQAEA
ANLFSSSEEFAFSDSLESEHSKAFGGMERLDMFFPFDPCLLRKSDRFIRPYFVYWSMVRP
PCDEAEGISDEDIGEQEIDLDVSKMSITPRKYSAYWIQDGFEEPRGMPARIRPSTSPESL
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgggagccgaggaattagctagctacggggcggggtttcatgaaatggataatgatgat
aattttagtgattctgaggtagtctatcatgtcaaggatgctcttaattcagtctcattg
ggtgatagtgacagttacgaccagcttgttggggttatgcatcacaatgaacgacttgcc
cctgaggaggtggcattgcttgtgaccagtttaaaggcactatctggagcagtttcttat
atagatgtcattctccatgactctcttcttacttcaatttttagaatgaacatgtggaac
tacagacctgatgtgatggatgcattgcttgaactaatcatatccttggctgcttcaaat
ggaaaacatgtcaattcatgtttggaaatgcttgtaagcaacttcacgccaccatactca
ttcgtagatacattgacgcagccacgtggtcttgcaaaaaaggaacaagttctttctcgt
gtgcattcagccctgaaacacatagctgatttggtgcctcttgctccctctatactatct
ccaattgtttctcaaagaatgccaatttatgcaaaggaacccttggctgtcatatatgtt
gagaacatgttaaagcttgagagtagtgcaattggagaatttgttaggagcacgatgctt
atggcactgatggatatgctgatagagttggatgtggagattggatgggatgacattttg
cgagatgactctagtaaaggaatatttcagatggagcttgagaatgtggatgaaattgca
gattatgacgaggaagatgattatgagcttccaagagaattaagtcggaagagtttagga
ggaaacttaattgctgaaaaattagatagcttgatggctctaacttttgagcatctcgaa
tcatgtaaagccaatggtcgtttgaacgaggtctttgaacctcttttagactcattccga
attacggttcttactacatacaagtcaaaatttgctcagtttgtgatgttctatgtctgt
gctctagatcctgaaaactgcggtgtgagatttgccacaatgcttgcagatatttttgtt
agcaaagactacccgctgccatttcggatgagtgctgttgcttatcttgctagcttttta
tcgcgtgcaaattttctgtcatccccttttgtcgctatcatgttgaaaaggttagtagat
tggtgcttggaatattgtaaaacagaaggtggtgaaataaaccctgtatcccatagactt
ttctactctgcatgccaggccatcatgtatgtgctttgcttccgaatgaaatcaatgatg
gatgttgcttggttcaagtctcatctgctctttatagagccgatcttgaagcatccattg
agcccattgaaggtatgtctgccttctattgttgatgagttttgccaacaagcagaagca
gccaatctattctcttcatctgaggaatttgcttttagcgactcactggaatccgaacat
tcaaaggcttttggtgggatggaaaggcttgacatgttcttcccattcgacccatgtttg
ctgagaaaaagtgacagattcatccgaccatactttgtgtattggtcaatggtcagacct
ccatgcgatgaagctgaaggcattagtgatgaagacattggcgagcaagagattgatctt
gatgtgagcaaaatgtcaatcacaccccggaagtattcagcttattggattcaggatgga
tttgaggagcctagaggaatgcccgcaagaattagaccctcaacaagtccagagtctttg
tga
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