KEGG   Carya illinoinensis (pecan): 122295765
Entry
122295765         CDS       T08745                                 
Name
(RefSeq) flap endonuclease 1 isoform X1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill03030  DNA replication
cill03410  Base excision repair
cill03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:cill00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    122295765
   03410 Base excision repair
    122295765
   03450 Non-homologous end-joining
    122295765
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cill03032]
    122295765
   03400 DNA repair and recombination proteins [BR:cill03400]
    122295765
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cill04147]
    122295765
DNA replication proteins [BR:cill03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    122295765
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     122295765
DNA repair and recombination proteins [BR:cill03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     122295765
Exosome [BR:cill04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   122295765
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc HHH_5 HHH_2 PM2_P3
Other DBs
NCBI-GeneID: 122295765
NCBI-ProteinID: XP_042960939
LinkDB
Position
2:340562..358487
AA seq 415 aa
MGIKGLTKLLADNAPKAMKEQKFESYFGRKIAIDASMSIYQFLIVVGRIGTEMLTNEAGE
VTSHLQGMFTRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKRADASQDLAEAMETGN
KEDIEKFSKRTVKVTKQHNEDCKRLLRLMGVPVIEAPSEAEAQCAALCKSGKVYAVASED
MDSLTFGAPRFLRHLMDPSSRKVPVMEFEVAKTLEELNLTMDQFIDLCILSGCDYCDSIR
GIGGQTALKLIRQHGSIENILENINKERFHIPDDWPYQEARQLFKEPVVYTDEEQLEIKW
TAPDEEGLITFLVNENGFNSERVTKAIEKIKAAKNKSSQGRLESFFKPVANPPAPIKRKE
SKCVLRSPRPAIGHKMFSLHASRSGLMVHASLSLPILALGVKNSTSLFRGVIFRA
NT seq 1248 nt   +upstreamnt  +downstreamnt
atgggtataaagggtttaacaaagctcttggcggacaatgccccaaaggccatgaaggag
cagaaattcgagagctattttggccgtaaaatcgctatcgacgccagcatgagcatttat
cagttcctcattgttgtgggaagaattgggaccgagatgctgaccaatgaggctggtgaa
gttactagtcatctgcaaggcatgtttacgcgcaccataagacttctggaagctggaata
aagccggtctatgtttttgatgggaagcctccagatctgaaaaaacaagagctggcaaaa
cgttactcgaaaagggccgatgctagccaggatttggcagaagccatggagactgggaat
aaggaagatattgagaaattcagtaaacgtacagtgaaggtgacaaagcagcacaatgag
gactgcaaaagactgttaagactcatgggagtgcctgtaattgaggctccttcagaagca
gaggcacaatgtgctgcactttgcaaatcaggaaaggtttatgctgtggcttcagaagac
atggactccctaacatttggagctcccaggttccttcgccatttgatggatcctagctca
agaaaagtcccagtaatggaatttgaagttgcaaagaccttggaggaactaaatcttact
atggatcaattcattgatttatgcattctgtctggatgtgattactgcgacagcattcga
ggaattggagggcagactgctttgaagctcatccgtcaacatggctctattgagaatata
ctggagaacataaacaaagagaggttccatataccagatgattggccatatcaagaggct
cggcagctttttaaagaaccagtagtctatactgatgaagagcaacttgagattaagtgg
actgccccagatgaagaaggactgattaccttccttgtgaatgaaaatggattcaacagt
gaaagagtgacaaaggcaatagaaaaaattaaagcagccaagaacaagtcatctcagggc
cgattagagtcattttttaagccagttgctaacccacctgcacctattaaacgaaaggaa
agcaaatgcgtgcttagatctcccagaccagcaattgggcataagatgttttctcttcat
gcatctaggtccgggctcatggtccatgccagcttgagcttgccaatcctggccctaggt
gtcaagaactccacatcattattcagaggtgtcatcttcagagcatga

DBGET integrated database retrieval system