Carya illinoinensis (pecan): 122295895
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Entry
122295895 CDS
T08745
Name
(RefSeq) two-component response regulator ARR12-like isoform X1
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122295895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cill03000
]
122295895
Transcription factors [BR:
cill03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
122295895
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
CENP-B_dimeris
FAM176
Motif
Other DBs
NCBI-GeneID:
122295895
NCBI-ProteinID:
XP_042961100
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All DBs
Position
15:44388823..44393600
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AA seq
707 aa
AA seq
DB search
MTVEDQKGGLAGEDVVRDCFPLGMRVLAVDDDPFCLKLLDTLLRKCQYRVTTTNQAVMAL
KMLRENKDKFDLVISDVNMPDMDGFKLLELVGLEMDLPVIMLSGHSDTQLVMKGVTHGAC
DYLLKPVRIEELKNIWQHVIRRKKFDSKDQKKSLNEDRALHGTGDSGQGFASTGNADQDD
RLSRKRKEQNEDEEEEDEENEHEDDDASNQKKPRVVWSVELHRKFVAAVNQLGLEKAVPK
KILDLMNVEGLTRENVASHLQKYRLYLKRISSVAAQQASMVAALGGKDSSYLRMGSLDGF
GEFRSLAGSGRLPSSALSSYTPGGMFGRLNSPAGLTLHGITSSGLVQPTGQNLSSSINTL
GKFQPALLPSNQSASLFQRIPTSLELNQLQQNKCTTWIGDFNPIKDSRGFTVTTSFSDSR
VNVGNSPSLLPSHSSNSLVLRGNPHQAHNGGAFGSQSSLGVASLTADAFENCSGGPSNFL
VHNQSNESWQGTVQSSRFSSNALPLNEPFNHDQLPSNNLSISSTSPHIGNSSIDFPSTSA
VLAPLEDSRGDIQCHEGMIGSVIHNMNYPSNQNWEEQKQDYNHNLNHTVSALNSLVPANG
IVNPLSQSLDQNTAISSKSFDESLIPQLHGGALSLDQNSEVERYALGTKMPNEDYLFEQT
RSLDGITQNSFGSLDDIMNTLMKREQNQTMLCDGEFASDAYSLGSCI
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgactgtggaggaccaaaaaggtggtttggcgggtgaagatgtagtacgggactgtttt
ccgttgggtatgcgtgttctggctgtggatgacgacccattttgcctcaaattgttggac
accctgcttcgtaaatgccagtatcgggttacaacaactaaccaggcggtaatggctctg
aaaatgttgagggagaacaaagataagtttgaccttgttatcagtgatgtgaatatgcct
gacatggatggttttaagctccttgagcttgtggggctcgaaatggacctacctgtcatt
atgttgtcaggccatagtgatacccagcttgtgatgaagggagttactcatggtgcatgt
gactatttgttgaagcctgttcgaattgaagagctaaaaaacatatggcaacatgtaatt
cgaagaaagaaatttgactccaaggaccaaaagaagtccctgaatgaagacagagctctt
catggtactggtgacagtggacaggggttcgcatcgacaggtaatgcagatcaggatgac
agactcagtaggaagcggaaggaacaaaatgaagacgaggaagaagaagatgaagaaaat
gaacatgaggatgacgatgcttcaaaccagaagaaacctcgggtagtttggtcagtagag
ctgcacagaaagtttgttgcagctgtaaatcaattgggacttgaaaaggctgttcctaag
aaaattcttgacctgatgaatgtagaagggcttacgagggaaaatgtggctagccatctg
cagaagtatagactctacctgaaaagaatcagcagtgtggcagcacagcaagctagtatg
gttgctgcattggggggtaaagattcctcttacttgagaatgggttcactagatggattt
ggggagtttcgctcgttggctggatcaggaaggctcccaagctcagctttatcatcatat
acaccaggtggtatgtttggtagactaaactcccctgcaggtttgacacttcatggaatt
acttcttctggacttgtacaaccgactggtcaaaacttgagcagctccatcaatactctt
ggcaagttccagccagctctattgccttcaaaccaaagtgcaagtttatttcaaaggatt
cctacatcattagagctcaaccagttgcaacagaacaagtgcactacgtggatcggagat
ttcaatcccattaaggattcaagaggtttcactgtcactactagcttctctgactcgaga
gtgaatgttggtaattcacccagtttattgcccagtcactcaagcaattctttggtgtta
cgagggaatccacatcaagcgcacaatgggggagcatttggaagtcaatcttcacttgga
gtggcttcactgactgcagatgcttttgagaattgcagtggtggcccatctaattttttg
gttcataatcagagtaatgaaagctggcagggtacagttcagtcatccaggttttcatcg
aatgctttgccattgaatgagccttttaatcatgatcaattgccttctaataacttgagt
atatcttctaccagccctcatattggtaacagttcaattgattttccttcaacaagtgcc
gttttagcccctctagaggattcaagaggagatattcaatgccatgaaggcatgattggt
agtgtcatccacaatatgaattacccatcaaatcaaaactgggaagaacaaaaacaggat
tacaaccataacttgaatcatactgtcagtgccttaaattctctggttcctgccaatggt
atagtgaatcctttgagccagagtttggaccaaaatactgcaatctccagcaagagtttt
gatgagtctttgattccccaattacatggtggtgctctgtcccttgatcaaaacagtgag
gttgagagatatgctctaggcacaaagatgcccaatgaggactacctctttgagcaaaca
aggtcactggatggtatcactcaaaacagttttggttctttggatgatataatgaataca
ttgatgaaacgggaacagaatcagacgatgctgtgtgatggggaattcgcatctgatgct
tactctcttgggtcgtgcatttga
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