Carya illinoinensis (pecan): 122296138
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Entry
122296138 CDS
T08745
Name
(RefSeq) probable indole-3-acetic acid-amido synthetase GH3.1
KO
K14487
auxin responsive GH3 gene family
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122296138
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Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
122296138
NCBI-ProteinID:
XP_042961521
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Position
2:complement(1171724..1174549)
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AA seq
599 aa
AA seq
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MAVDSQLSSPLGPTACDKDSKALQFIEVMTRETGAVQERVLGEILIRNAETEYLRRFQLN
GATDRDTFKSKVPVVTYEDLQPDIQRIANGDRSPIFSAHPISEFLTSSGTSAGERKLMPT
IHEELDRRQLLYSLLMPVMNQYVSGLDKGKGLYFLFVKAETKTPGGLLARPVLTSYYRSE
HFKTRPYDPYNVYTSPNEAILCADSFQSMYTQMLCGLLMREEVLRVGAVFASGLLRAIRF
LQLHWQQLAHDISTGALNPKITDPSLRDCMSKIIKPNPELSKFITQECSGENWEGIITRV
WPNTKYLDVIVTGAMAQYIPILEYYGGGLPLSCTMYASSECYFGLNLKPMSSPSEVSYTI
MPNMCYCEFLPHEPDAPAVSRDSPPQLVDLADVEVGKQYELIITTYAGLCRYRVGDILQV
TDFYNSAPQFRFIRRKNVLLSIDSDKTDEAELQKAIDNASALLKEFNTSVVEYMSYADTK
SIPGHYVLYWELLVKDPANSPTHEVLNRCCLDMEESLNSVYRQSRVADNSIGPLEIRVLD
NGTFEELMDYAISRGASINQYKVPRCVNSSPIVELLDSRVASVHFSPEPPQWNPEGRRC
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggcagttgattcacagctctcctccccgcttggccctacggcgtgcgacaaggattcc
aaggcgcttcagttcatcgaggtgatgacgagggaaacaggcgctgtacaggagagggtt
ttgggggagatactgattcggaacgccgagactgagtacctcaggaggttccagctcaat
ggagctacggaccgtgacacgttcaagtcgaaagtccctgtcgttacttacgaggatctt
cagcctgacatccagcgtattgctaatggtgaccgatcccccatcttctcggctcacccc
atttctgagttcctcaccagctctgggacttcggctggtgagaggaaactaatgccgacg
attcatgaagagttggaccgtcgccagctattgtacagtcttctcatgccggtgatgaac
caatacgtttccggtttagacaaagggaagggactctacttcttgttcgttaaggcagaa
acaaagactccaggtgggctcttggcacgtccggtgctcaccagctactacaggagtgaa
catttcaagaccaggccgtatgacccttacaacgtctataccagcccgaatgaggctatt
ctctgcgccgactcgtttcagagcatgtacacccagatgctctgcggcctccttatgcgc
gaagaggttctccgggtcggtgccgtgtttgcctccggcctgctgagagccatccggttc
ctacaacttcactggcaacaactggcccatgacatctctactggagccttaaaccctaaa
attacggatccttctctccgggattgcatgtccaaaattatcaaacccaatcccgaactc
tccaagttcataacccaagagtgttcaggagagaactgggaaggtataatcacaagagtt
tggcctaacacgaaatacctagacgtgattgtaacgggtgcaatggctcagtacataccc
attcttgaatattacggcggagggctgcctctttcatgcactatgtatgcctcctccgaa
tgctactttgggcttaacctcaagccaatgtccagtccttctgaggtttcctacactatc
atgccaaacatgtgttactgcgagttcttgccacacgagccggacgctccagctgtatct
cgtgactcacctccacagcttgttgaccttgccgacgtcgaagttgggaaacaatacgag
ctcataatcaccacctatgccgggctttgtcgctaccgagtgggcgacatcctccaagtc
accgatttctacaactcggctccccaatttcgcttcataagaagaaagaacgtgttgttg
agcatcgactcggacaagacggacgaagctgagttgcaaaaggctatcgataatgcatca
gcgctcctaaaggaattcaacacaagtgtggtcgagtacatgagctatgcagacacaaaa
tcaataccaggacactatgtactttactgggagttgctggtgaaggacccggctaactct
ccgactcatgaggtcctgaaccgatgctgcttagacatggaggagtctctgaactcggtg
tacagacaaagccgagttgcagacaactcgatcggtccccttgagattagagtgctcgat
aatggcacctttgaagagctcatggattatgcaatctcccggggtgcatctatcaaccag
tacaaagttccaaggtgcgtgaactcctccccgatcgtggaactcctcgactccagagtg
gcctcggtgcatttcagtcctgagccgccgcaatggaaccccgaaggacgtcgatgttga
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