Carya illinoinensis (pecan): 122296243
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Entry
122296243 CDS
T08745
Name
(RefSeq) protein argonaute 1-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122296243
03036 Chromosome and associated proteins [BR:
cill03036
]
122296243
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
122296243
Chromosome and associated proteins [BR:
cill03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
122296243
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
122296243
microRNA pathway
RISC loading complex
122296243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
Gly-rich_Ago1
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
122296243
NCBI-ProteinID:
XP_042961726
LinkDB
All DBs
Position
15:39587867..39596421
Genome browser
AA seq
1078 aa
AA seq
DB search
MVRKRRTELPSGSESSQAQQETSGAGSTSGAGSTSGGGSGSGRGHQPRPSERSAPPQQQH
AGGGGRGWPPQGGRGGYGGGRSGRGMPPQQQYGGTPEYQGRGRGGPPQQGGRGGYSGGGP
AGISGRGGPSSGGPSRPSDPNLHQATRVQHQPGISPQPTSSEASSSTRPPEPSQVVQQFE
QLTIQGAQSQAIQPVPPSSKSVRFPLRPGKGSTGTKCIVKANHFFAELPDKDLHQYDVTI
TPEVTSRGVNRAVMEQLVRLYRETHLGKRLPAYDGRKSLYTAGPLPFLSKDFKITLIDED
DGSGGQRREREFKVVIKLAARADLHHLGLFLQGRQADAPQEALQVLDIVLRELPTTRYCP
VGRSFYSPDLGRRQSLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVTQ
LLNRDVISRPLSDSDRVKIKKALRGVKVEVTHRGNMRRKYRISGLTSQATRELTFPVDEK
GTMKSVVEYFLETYGFTIQHSQWPCLQVGNQQRPNYLPMEVCKIVEGQRYSKRLNERQIT
ALLKVTCQRPRDRELDIMQTVRHNAYHEDPYAKEFGIKISEKLASVEARILPAPWLKYHD
TGREKDCLPQVGQWNMMNKKMVNGGVVNYWICINFSRNVQDSVARGFCHELAQMCYISGM
AFNPEPVLPPVSGRPDQVERVLKTRYHDAMTKLQSQRKELDLLIVILPDNNGSLYGDLKR
ICETDLGLVSQCCLTKHVFRMNKQYLANVALKINVKVGGRNTVLVDALSRRIPLVSDRPT
IIFGADVTHPHPGEDSSPSIAAVVASQDWPEITKYAGLVCAQAHRQELIQDLFKTWQDPA
RGTLTGGMIKELLVSFRRATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPN
YQPPVTFVVVQKRHHTRLFANNHHDHNSVDRSGNILPGTVVDSKICHPTEFDFYLCSHAG
IQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARF
YMEPESSESGSMTSGAATGRGGGMGGAGPRSTRAPGISAAVRPLPALKENVKRVMFYC
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggaagaggagaactgagcttcctagtgggagcgaaagctctcaggctcagcag
gaaaccagtggggctggtagtactagtggggctggtagtactagtgggggtggtagtggt
agtggtagaggccaccaaccacgcccttctgagaggagcgctccaccccagcagcaacat
gcaggaggaggaggaagaggttggcccccccaaggaggtcgtggaggttatggtgggggg
cgcagcggtcgtggaatgccaccacagcaacagtatggtgggacacctgaatatcaaggc
cggggaaggggagggccaccccagcaaggtggccgtggagggtatagtggcggcggccct
gccggcatcagtggccggggcggaccttcttctggtggcccatcaagaccatcagatccc
aacctgcaccaagcaacccgggttcaacatcaacctgggatttcgcctcagccaacgtca
tctgaggcgagttcatctacccgacctccggagccatctcaagtggtccagcaatttgag
caactcaccatccaaggcgcacagagccaggcaattcaacctgtgccaccatctagtaaa
tcagtgaggttccctcttaggcctggcaagggtagcactggaacgaagtgtatagttaag
gcaaatcacttctttgctgaattaccagacaaagatttgcatcagtatgatgttacaatt
actccggaggtgacgtcccgtggagttaaccgtgctgtaatggaacagctggttaggttg
tacagagagacgcatcttggaaagaggcttcctgcctatgacgggcgaaagagtctgtat
actgctgggccactcccatttctatccaaggatttcaagattacacttattgatgaagat
gatggatccggtgggcaaaggagagagagagaatttaaagtcgtgataaaattggctgca
cgtgcagacctgcaccatttaggactcttcttgcagggtaggcaagctgatgcaccccag
gaagcacttcaagttcttgatattgtcctgcgtgaattacctactacgaggtactgtcct
gtgggtcgttcattttattctcctgatctgggaaggaggcaatcactgggtgagggattg
gagagttggcgcggtttttatcaaagcattcgtccaactcagatggggctgtctctgaat
atagacatgtcttcgactgcattcattgagccattgccggtaattgattttgtaacacag
ctgctgaatcgggatgttatttctagacctttgtccgattctgatcgtgtcaagatcaaa
aaggctctacgaggggtcaaagttgaggttacacatcgaggaaatatgcgcaggaagtac
cgtatatctggtttaacatcgcaggcaacaagagagctgacgtttccggttgatgaaaaa
ggtacaatgaaatcagttgttgaatatttccttgaaacttatggttttactattcaacat
tcacaatggccatgtctgcaagtgggtaaccaacagagaccaaattatttgcctatggag
gtttgcaagattgttgagggtcagaggtactcgaagaggttaaatgagagacagattact
gctttattgaaggtgacctgccagcgtcctcgagacagggagctagatataatgcagacc
gttcgtcacaatgcttaccatgaggatccttatgcaaaagagtttggaatcaaaattagt
gagaagctggcttcagttgaagctcgaattcttcctgcaccatggctgaaatatcatgat
acaggcagagaaaaggattgcctgccacaagttggacaatggaacatgatgaataagaaa
atggtgaatgggggagtagttaactattggatctgcatcaatttttcacggaatgtgcaa
gatagtgtggcccgcgggttttgccatgaacttgcacaaatgtgttacatttctggaatg
gcatttaatcctgaaccagtgcttccacctgtgagtggccgtcctgatcaggtagaaaga
gtccttaaaactcggtaccatgatgccatgaccaaactccagtctcagagaaaggagctt
gacctgcttatcgttattttgccagataacaatggctcactttatggtgatttgaagcga
atctgtgagactgatcttggccttgtttcccaatgttgcttgacgaagcatgtatttaga
atgaataaacaatacctggccaatgtggcattgaagataaatgtcaaggttggaggaagg
aatactgtgcttgtggacgcactgtcaaggcgtatacctttagtcagtgatcggcctact
attatctttggtgcagatgttacccatcctcatccaggagaagattcaagcccttcaatt
gcagctgttgtggcatctcaagattggccagaaatcacaaagtatgctggtttggtttgt
gctcaagcccatcgacaggagctgattcaagatcttttcaagacatggcaggatcctgca
agagggacattgactggtggcatgattaaggaactactcgtatcttttcgtagagcaact
ggtcagaaaccacaacgtatcatattttacagggatggtgtgagcgaggggcaattctac
caggttttgctgtatgagctagatgctatccgaaaggcgtgtgcctctttggagccaaac
tatcagcctcctgtgacttttgttgtggttcagaagcgccatcacacaagattgtttgcc
aacaaccatcatgaccacaattcagttgataggagtggaaacatattgccaggtactgtt
gtagactccaaaatttgtcacccgactgaatttgacttctacctctgttcgcatgctgga
attcagggtacaagtcgtccagctcattaccatgtactatgggatgagaacaagtttaca
gctgatgggctgcagtcccttacaaataacctttgttatacatatgcaaggtgcactcga
tctgtttccattgtgcccccggcatactatgcccatcttgctgcattccgagctcggttc
tatatggagccagagtcctcagaaagtggttccatgacaagtggtgctgccactggacgt
ggaggaggcatgggcggagcaggtccacgaagcacacgagcaccaggaattagtgctgct
gtgagacccctaccagcacttaaggagaatgttaaaagggtcatgttctactgttag
DBGET
integrated database retrieval system
