Carya illinoinensis (pecan): 122296317
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Entry
122296317 CDS
T08745
Name
(RefSeq) eukaryotic initiation factor 4A-15-like
KO
K03257
translation initiation factor 4A
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122296317
03012 Translation factors [BR:
cill03012
]
122296317
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cill04147
]
122296317
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
122296317
mRNA cycle factors
Stress granule specific factors
122296317
Translation factors [BR:
cill03012
]
Eukaryotic type
Initiation factors
eIF-4
122296317
Exosome [BR:
cill04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122296317
Exosomal proteins of bladder cancer cells
122296317
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
DUF2780
AAA_19
Motif
Other DBs
NCBI-GeneID:
122296317
NCBI-ProteinID:
XP_042961844
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Position
15:6309432..6313791
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AA seq
413 aa
AA seq
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MASAAPEGSQFDARQFDAKMSELLGADGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGF
EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTREL
AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRP
DYIRMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVR
ILVKRDELTLEGIKQFHVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR
GRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP
ENYLHRIGRSGRFGRKGVAINFVTADDERMLFDIQRFYNVVIEELPANVADLL
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggctagtgcggcacctgagggatcccaatttgatgcccgtcaatttgatgctaaaatg
agcgagttacttggagcagatgggcaagatttcttcacatcatatgatgaggtttatgat
agttttgatgcaatgggattgcaagagaacctccttagaggaatctatgcttacggtttt
gagaagccctctgcaattcagcaaagggggattgttcctttctgtaaaggacttgatgtg
attcaacaagcacagtctggaactgggaaaactgctactttttgctccggtatcttgcag
cagcttgattatggcttggtcgaatgccaggccttggttcttgctcccactagggagctt
gcacaacagattgagaaggtcatgcgggcccttggtgactatttgggtgtcaaggttcat
gcctgtgttggtggaacaagtgttcgtgaggatcaacgaattctttctgctggggtccat
gttgttgttggtacccctggtcgtgtctttgacatgcttcgcaggcaatcactgcgccct
gattacattaggatgtttgtgttagacgaagcggatgaaatgctttcacgaggctttaag
gatcagatctatgatatcttccagctgctgccacctaaaattcaggttggggttttctct
gccacaatgccgcctgaggctcttgagattaccaggaaattcatgaataaacctgtaagg
attctggttaaacgtgatgagctcacccttgagggtattaagcaattccatgttaatgta
gacaaggaggaatggaagcttgagacactttgtgatctttatgaaaccttggcaatcacc
caaagtgtcatctttgtgaacacaaggcgcaaggttgattggctgacagacaagatgcgc
ggccgtgaccatacagtttctgccacccatggagacatggatcaaaatacaagagacatc
atcatgcgggaattcaggtctgggtcctctcgtgttctcatcactactgatctcttggcc
aggggtattgatgtccagcaagtctctcttgtgatcaattatgatcttcctactcagcca
gagaactacctccatcgaattggtcgtagtgggcggtttggaaggaagggtgttgccatc
aattttgtgaccgcagatgatgagaggatgctctttgacatccagaggttctacaatgtg
gtgattgaggagctgccagcaaatgttgccgatctcctttga
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