Carya illinoinensis (pecan): 122296371
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Entry
122296371 CDS
T08745
Name
(RefSeq) AMSH-like ubiquitin thioesterase 1
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122296371
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cill01002
]
122296371
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122296371
04121 Ubiquitin system [BR:
cill04121
]
122296371
Enzymes [BR:
cill01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122296371
Peptidases and inhibitors [BR:
cill01002
]
Metallo peptidases
Family M67
122296371
Membrane trafficking [BR:
cill04131
]
Endosome - Lysosome transport
Others
Others
122296371
Ubiquitin system [BR:
cill04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
122296371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
122296371
NCBI-ProteinID:
XP_042961925
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All DBs
Position
15:35133464..35144996
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AA seq
529 aa
AA seq
DB search
MRSSSDGINVAASAQKLDVDNRISLRYYYRIADNILKQADIFRRERNIIDLYVMLLRFSS
LVSETIPYHRDYKSSLQSQKAYLKKRFLNALAELEELKPAVQLKINELNRKDTYQVNGRG
QFHQNNSLEWSPVKNQTSTNYGLIKAARPATHQLLYQGSRAQQYSYARPVEERFSKMSLG
FPRPKEETLSRHSILGPNGLSGHWHPPISDKGVRYPSTVDLTPVEIPSLQETINDGLSVK
TDGGNSEDETSSAELILTQADNTLMHHVAEPGSLISFEPTESPAQPDIIRQPSPPPVLAE
VQDLVPAVSQHNCSNVLAELQDLIPAVSSEVSEVEHGMGTSPQDNLVGAESPLQLHISTT
MMETFMKLAKSNTDRNLETCGVLAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEV
QDKQSLFPLGWIHTHPSQSCFMSSIDVHTHYSYQIMLPESVAIVMAPKDDSRKHGIFRLT
TPGGMSVIRQCQQRGFHPHEPPPDGGPIYKSCTDVYMNPILKFDVIDLR
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcatcttcagatggaattaacgtcgccgccagcgctcagaaacttgatgtcgat
aatcggatttctctccggtactactaccggatcgctgataatattctcaaacaggctgac
atctttcgaagagagaggaatatcatagacctatacgttatgcttctaagattttcaagt
ttggtctctgagacgataccataccatcgagattacaaatcctctcttcaaagccaaaaa
gcttatttgaaaaagagattcttgaatgcattggctgagctggaggagctgaagcctgca
gtgcaactgaagatcaatgaattgaacagaaaagacacatatcaagtaaatgggcggggc
cagtttcatcaaaataattcattggagtggtctccagttaaaaatcagacctcaactaat
tatggcttaataaaggcagcgagaccagctacacatcaattattgtatcaaggttcaagg
gctcaacaatattcatatgccaggccagtggaagagcgattcagcaaaatgtctttaggt
tttccacgtccgaaggaggaaactctctccagacattctatattgggtcctaatgggctt
tctgggcattggcatccccctataagtgataaaggggtccgatatccaagcactgtggac
ctgactccagttgaaattccaagcctgcaggaaaccataaatgatgggctttcagttaaa
acagatggtggaaattcagaagatgaaacatcaagtgcggagttgattcttacccaggct
gataatactctgatgcatcatgttgcggaacctggttcactgatttcctttgaaccaaca
gaatcccctgctcagccagatattatcagacagccttcccctccgcctgtacttgctgaa
gtacaagatttggttcctgcagtgtcacagcataactgttcaaatgtacttgcagaatta
caagatttgatacctgcagtgtcatctgaagttagtgaggtagaacatggaatggggact
tctccacaagataatttggttggtgctgaatctccactgcaattgcacatttcaaccaca
atgatggagacctttatgaagcttgctaagtcaaacacagatagaaacttagaaacatgt
ggtgtccttgcaggttcacttaaaaacagaaagttttatattacggccctcattattcct
aagcaggaatcaacatcagattcttgtcaggcaacaaatgaggaggaaatatttgaagtg
caggacaagcaatctctcttcccacttgggtggattcatacacatccttctcagtcttgt
ttcatgtcatcaattgatgttcacacccattactcatatcagattatgttgcctgaatct
gttgcaatcgtcatggcacctaaagatgattcaagaaagcatggcattttccggttgaca
acccccggcgggatgtctgtcattagacaatgtcagcagcgtggctttcatccacacgag
ccacctcctgatggtgggcccatatacaagtcttgcacagatgtttacatgaatcccata
ctaaaatttgatgtcattgatctgcggtga
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