Carya illinoinensis (pecan): 122296375
Help
Entry
122296375 CDS
T08745
Name
(RefSeq) serine/arginine-rich splicing factor SR34A-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122296375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cill03041
]
122296375
Spliceosome [BR:
cill03041
]
Common components
Common spliceosomal components
SR proteins
122296375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Transformer
RRM_7
RRM_3
RRM_occluded
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
122296375
NCBI-ProteinID:
XP_042961931
LinkDB
All DBs
Position
15:34965228..34972698
Genome browser
AA seq
260 aa
AA seq
DB search
MSGRFSRSIYVGNLPADIRECEIEDLFYKYGRILDIELKIPPRPPCYCFVEFDSTRDAED
AIRGRDGYNFDGCRLRVELAHGGGGRGPSSSDRRIGYSGGGGGGSSGGGRFGASRHSEYR
VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNHDDMKYAIRKLDDTE
FRNPWARAYIRVKKYESSRSRSRSRSRSRSRSERRDRSKSLERSISRSVSRSRSASPIKS
SRPRSRSRSGSPHKARSGSG
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtcgtttttctcgctcaatctatgttggcaacctgcctgcagatataagagaa
tgtgaaattgaagatctattctacaagtatggccgtatattggatattgaattaaagatt
ccgccccgccctccgtgttattgttttgtggagtttgatagtactcgggatgcagaagat
gcaattaggggtcgtgatggctataattttgatggttgccgtctaagggttgaacttgcc
catggtggtggtggtagagggccatcttcaagtgatcgtcgcattggctacagtggtggt
ggtggtggtggcagcagtggtgggggccgatttggtgcttcacgccattctgaatatcga
gttattgttcgtgggcttccttcttctgcttcctggcaagacttgaaggatcatatgcgt
aaagctggtgatgtatgttttgcagaggtatcccgtgacagtgaagggacctttggcatt
gttgattacactaatcacgatgacatgaaatatgctatccgtaaactcgatgacaccgaa
ttcagaaatccttgggcaagagcttatattcgggtgaagaagtatgagagcagtagaagc
cgcagccgaagtaggagccgcagccgaagcagaagtgaaagaagggacaggagtaaatca
ctggagcgctctatttctcgatcggtatcaaggtccagatctgcctctccaatcaaatct
tccaggccaagatcaagatcgaggtcaggatctccccacaaggcacggtcgggtagtggc
tga
DBGET
integrated database retrieval system
