Carya illinoinensis (pecan): 122296468
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Entry
122296468 CDS
T08745
Name
(RefSeq) actin-interacting protein 1-2
KO
K24736
WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cill04990
]
122296468
Domain-containing proteins not elsewhere classified [BR:
cill04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
122296468
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Ortholog
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GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
Beta-prop_EML
WDR55
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
EIF3I
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
NBCH_WD40
WDR90_beta-prop_4th
eIF2A
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
122296468
NCBI-ProteinID:
XP_042962145
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Position
15:complement(37050893..37057207)
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AA seq
610 aa
AA seq
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MTQLAETYACVPTAERGRGILISGSPKSNTILYTNGRSVIILNLDNPLDVSVYAEHAYPA
TVARFSPNGEWIASADVSGAVRIWGTRNEFVLKKEFKVLSGRIDDLQWSPDGMRIVACGE
GKGKSFVRAFMWDSGTNVGEFDGHSRRVLSCAFKPTRPFRIVTCGEDFLVNFYEGPPFKF
KLSHRDHSNFANCVRFSPDGSKFITVSSDKKGIIYDGKSAEKIGELSSEDGHKGSIYAVS
WSPDGKQVLTMSADKSAKIWDISEDGNGKVKKTLTSPGSGGVEDMLVGCLWQNDHLVTVS
LAGTISLFSATDLDKAPVLLSGHMKNVTSLVVLKNDPKVIVSCSYDGLIIKWIQGVGYSG
RLQRKDNSQIKCLAAVEEEIVTSGFDNKIWRVPVHGDQCGDADSVDIGTQPKDLSLALLS
PEIALVSTDSGVVILHGTKVVSTVNLGFTVTASAIAPDGMEAIIGGQDGKLHIYSITGDT
LKEEAVLEKHRGAVSVIRYSPDVSMFASGDLNREVVVWDRVSREVKLKNMLYHTARVNCL
AWSPDSRMVATGSLDTCVIIYEVDKPASSRLTIKGAHLGGVYGLAFTDQYTVVSSGEDAC
VRVWRLTPQS
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgactcaactcgcagagacctatgcgtgcgtcccaaccgccgagcgcggccgggggatc
ttgatctccggcagccctaaatccaacaccatcttatatactaatggcagatccgtgatc
atcctcaacctcgacaaccccctcgacgtctccgtctatgcagagcacgcctaccctgcc
accgtcgcccgattttcccccaacggcgagtggatcgcctccgccgacgtctccggggcc
gttcggatctgggggacgcgcaatgagttcgttttgaagaaggagttcaaggtcctctcc
ggtcggattgacgatctccagtggtcccccgacgggatgaggatcgtcgcatgcggcgaa
ggcaaaggaaaatccttcgttcgcgctttcatgtgggattcagggacaaatgttggtgag
tttgacgggcactctaggcgagtattaagctgtgcgttcaagccgacaaggccatttcgg
atcgtcacatgcggagaggatttcctggtgaatttttacgaaggaccgccttttaaattc
aagctatcccacagggatcattcaaattttgctaattgtgtaagattttctccagatggc
agtaagttcatcactgtaagctctgataagaaaggtataatatatgatggcaaaagtgct
gagaagatcggggagctgtcctctgaagatggccacaagggcagcatttatgctgttagc
tggagccctgatggtaaacaggttctgaccatgtctgctgacaaatctgcaaagatatgg
gacatatctgaggatggtaatgggaaggtgaagaaaacgttgacttctccaggttctggt
ggtgtggaagacatgctagttggttgtctttggcaaaatgatcatcttgtaactgtttct
cttgccggcacaattagcttgttctctgcaactgatcttgataaagctccagtattattg
tctggacatatgaaaaatgttacctcattagtcgttctaaaaaatgacccaaaagttata
gtatcttgcagctatgacggtttgataatcaaatggattcaaggtgttggatatagtggc
agactacagaggaaagataattctcaaatcaaatgtttggctgctgttgaagaagagatt
gttacatctggatttgacaataagatatggagagttcctgtacatggggatcaatgtgga
gatgcagattcggttgatattggcactcaaccaaaagacttgagccttgcccttctctct
cctgaaattgccttggtttcgactgattctggagttgtcatcctccatggcactaaggtt
gtgtcaaccgttaaccttgggttcaccgtaaccgcatctgcaattgcacctgatggcatg
gaagctattattggtgggcaggatggtaaattacacatttactctatcacaggtgataca
cttaaagaggaggcagttcttgagaaacacaggggcgctgttagtgtcatacggtactct
cctgatgtttcaatgtttgcatcaggggatctcaatcgagaagttgttgtctgggatcgt
gtctctcgagaggtgaagcttaagaacatgttataccacactgctcgcgtaaactgcctt
gcttggtctcctgatagccgcatggttgctactggatcactggatacttgtgtcataata
tacgaagttgacaagccagcatctagccgtttgaccataaagggtgctcacctgggcggt
gtttatggattagctttcactgatcagtacactgtggtgagctctggtgaggatgcctgt
gttcgtgtttggaggttgacacctcaatcatag
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