Carya illinoinensis (pecan): 122296910
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Entry
122296910 CDS
T08745
Name
(RefSeq) LOW QUALITY PROTEIN: ABC transporter G family member STR-like
KO
K05681
ATP-binding cassette, subfamily G (WHITE), member 2
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill02010
ABC transporters
cill04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122296910
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
122296910
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cill02000
]
122296910
04147 Exosome [BR:
cill04147
]
122296910
04090 CD molecules [BR:
cill04090
]
122296910
Transporters [BR:
cill02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
122296910
Exosome [BR:
cill04147
]
Exosomal proteins
Exosomal proteins of breast milk
122296910
CD molecules [BR:
cill04090
]
Proteins
122296910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
ABC2_membrane_3
AAA_21
ABC2_membrane_7
PDR_assoc
PBP1_TM
DUF3246
Motif
Other DBs
NCBI-GeneID:
122296910
NCBI-ProteinID:
XP_042962641
LinkDB
All DBs
Position
15:38252933..38255374
Genome browser
AA seq
641 aa
AA seq
DB search
MDLQSATHTYIGDEGRRGVSGGERRRVSIGIDIIHKPSLLFLDEPTSGLDSTSAYSVVEK
VKEMAKGGSTVLMTIHQPSFRIQMLLDRITILARGRLIYLGSPLALPAHLSGFGRPVPDG
ENSIEYLLDVNKEYDESTIGLDPLVLYQLDGIKPDQVARTPIPKTPKTSRTPYGKNPASK
HVINLNSSAFSSRNMTSQPNSGKFEYDDEDDDDDDDEDFDNSLERKGVNTPISMHSGVYN
PPLASNFYKDFPVWLYHGVKGTPHRPPSWTPARTPEVLAPAGPRSLVSSQYPTPQQNPSR
XLPVVFSSSMDSCVPSSYEEFEYEEVLDEPSHGSKFANPWLREVVVLSWRTALNVIRTPE
LFLSREIVLAVMALILSSLFRNLDHPTFKDVNRLLNFYIFAVCLVFFSSNDAVPTFIQER
FIFIRETSHNAYXTSSYVISSLIVYLPFFAIQGFTFAAITKAILHLESNLKNFWIILYAS
LISTNAYVMFVSALVPSYITGYAVVIATTALFFLTCGFFLKQSQIPIYWRWLHFISAIKY
PFEALLTNEFKGKRCYNGQPKNLTPGPLRNVKISSLHNKSIQNGELLPRENCMLIGEDVL
FSMDITKENIWYDIAILLAWGVLYRFFFYLVLRFYSKNERK
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggatctacagagtgcaactcatacatatattggcgatgagggaagaagaggggtgtca
ggaggggagaggcgaagagtctccataggaattgacatcatccacaagccatcactactg
ttccttgacgaacccacctcaggtcttgattctacaagtgcctacagtgtggtagaaaag
gtgaaggagatggctaaaggtggcagcacagttctaatgaccatccaccaaccttcattt
cgaattcaaatgctcttggatcgcatcactatccttgcaagggggagattgatatatttg
gggagcccccttgccctacctgctcatctatctggatttggaagaccagtaccggacggt
gagaacagtattgagtatctcctagatgtgaacaaagagtatgatgaatcaactataggg
ctagacccactagtgctgtatcaactagatggcatcaaacctgatcaagtggccaggaca
cccatcccaaaaacaccaaaaacatctcggacgccttatggaaagaaccctgcatctaag
cacgtgatcaacctcaatagcagtgcattctcttctaggaacatgacttctcaaccaaac
tctggaaagttcgagtatgatgatgaagatgatgacgacgacgatgatgaggattttgac
aactcccttgaaaggaaaggtgtaaatacaccaataagcatgcacagtggtgtctataat
cctcccttggcttctaatttctacaaagatttcccagtctggctttaccacggggtaaag
gggacccctcatcgtccaccatcatggactccagctaggactcccgaagtactcgctcct
gcaggaccaagaagcttggtttcaagtcaatatccaacacctcaacaaaatcccagtaga
nnactcccagtggtctttagctcgtccatggactcttgtgtacccagttcttatgaagaa
ttcgagtatgaagaggttctcgatgagccaagccacggctccaagtttgcaaacccatgg
ctgcgtgaggttgtcgtgctctcatggcgcacggcacttaatgtcatccgcactccagag
ctcttcctttcacgtgagattgtattggcagttatggcactcattctatcctccctgttc
agaaacctcgaccatcctaccttcaaagacgtcaaccggcttctcaacttttacatcttt
gcagtttgccttgttttcttttcctccaatgatgctgtcccaacttttatccaggaaagg
ttcattttcatcagagagacctcccacaatgcttacngtacttcttcctatgtcatttcc
tcactcattgtgtatctcccattctttgccattcaaggttttacctttgcagccataacc
aaagccattcttcatctcgaaagcaatcttaagaacttctggataatcctctacgcctca
ctcattagcactaatgcttatgtgatgtttgtcagtgcacttgtcccaagctacataaca
gggtatgctgttgtgattgccaccacagctctcttcttcctgacttgtgggttcttcctg
aagcaatcccagatacctatttactggagatggctccattttatctctgcaatcaaatac
ccatttgaggcattgctaacaaatgaattcaaagggaaaaggtgctataatgggcagcct
aaaaatctcacacctggtcctctgagaaacgtgaaaatcagctcactgcataacaaatcc
attcagaatggagaactgctaccaagagagaattgcatgttgataggagaagacgttcta
ttctcaatggatattacaaaggaaaatatttggtatgacatagcaatcttgctggcttgg
ggagttctctatcgcttcttcttctacttggttctgagattttattccaagaatgagaga
aaatga
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