Carya illinoinensis (pecan): 122296966
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Entry
122296966 CDS
T08745
Name
(RefSeq) plant-specific TFIIB-related protein 1
KO
K03124
transcription initiation factor TFIIB
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122296966
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cill03021
]
122296966
Transcription machinery [BR:
cill03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
122296966
Prokaryotic type
Archaeal type
TFB
122296966
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Cyclin_C
Zn_Ribbon_TF
HTH_Mga
Motif
Other DBs
NCBI-GeneID:
122296966
NCBI-ProteinID:
XP_042962696
LinkDB
All DBs
Position
2:2852602..2855927
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AA seq
519 aa
AA seq
DB search
MKCPYCSSAQGRCATTSSGRSISECASCGRVIEERQSQPHHLFHLRSQDNPLFLVTSDLP
SLDPHHHDRVGEEDPFEPTGFITAFSTWSLESSPLFLRSCLSFSGHLAELERILESSSSS
SSSSSSTVVVDNLRAYMQIIDVASILGLDHEISDHAFQLFRDCCSATCLRNRSVEALATA
ALVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCT
LLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGL
TEVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRTSATKVDLFESTSSLDR
DKQLEIKANKPNEVPDTGHQVRAKEEAESRGNSYVLNRPQTLWQPQTPLGMSGPRTVSEK
NQNITRGTDINELHPNRQELEQKADQDTNHVTNPLKPNQLVNPPTLSASSVSRQFWPPPI
SGPSNVRYVQPPNVVSGYSEHKGTGNQNGSRNRNQCRDP
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgcccgtactgctcgtcggcgcagggacggtgcgctaccaccagctccggccgt
tcgatatcggagtgcgcgtcgtgcggccgcgtgatcgaagagcgacaatcgcagccacac
cacctcttccacctccgctcccaagacaaccctctcttcctcgtcacctccgacctcccc
tccctcgacccccaccaccacgatcgcgtcggcgaagaagatcctttcgagcccaccggc
ttcatcaccgccttctccacctggtcccttgagtccagccctctctttctccgctcctgc
ctctctttctccggccacctcgctgagcttgagcgcatccttgaatcttcttcttcttct
tcttcttcgtcctcttcgacggttgtggtcgataatctgagagcctacatgcaaattatc
gacgtagcctcgattctgggtttggaccacgagatatccgaccacgcgtttcagctattt
agggattgttgctccgctacttgtttgaggaatcgtagcgtggaggcgcttgccactgct
gctcttgtccaggccattagagaggcccaagagcccaggaccctccaggaaatctcaatt
gcggcgaatgtaccccagaaggagatcgggaagtacatcaagatacttggagaagcttta
caactaagtcagcccattaacagcaattccatatcagtccatatgccaaggttttgcacg
cttctccagctcaacaaatctgctcaggagcttgcaactcacatcggagaagttgttatc
aataaatgcttctgcactcgaaggaatcctattagcatctctgcagcggctatttatttg
gcctgccaactagaagacaaacgcaaaacccaggcagagatctgtaaggtgacaggcctc
actgaggtcactcttcgtaaggtctacaaggagctattagaaaattgggatgatttgcta
ccatctaattacactcctgctgttcccccagagagagcttttcccacaactgtgattgct
tcaggccgtacttcagcaactaaagttgatttattcgaatcgacttcttcactggacaga
gacaagcagctagaaattaaagctaacaagccaaatgaggtcccagacacgggccatcag
gttagggcaaaagaggaagctgaaagtagaggcaactcctacgtgctgaacagaccacaa
acgctctggcaaccccaaactcctcttgggatgtctggccctaggacagtaagtgaaaag
aatcagaatattactcgaggaacggacattaatgagctgcaccctaaccgtcaagagtta
gagcagaaggcagatcaggacacaaatcacgtgaccaatcccctgaagccaaaccaactt
gtaaatccgccaactttgagtgcaagttctgtttcccggcagttttggcccccacctatt
tccgggccttcaaatgttcgatatgttcagccaccaaatgtagtttcaggttattctgaa
cataaaggaactgggaatcaaaatggaagtagaaatcgcaatcagtgtagggatccctag
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