Carya illinoinensis (pecan): 122297027
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Entry
122297027 CDS
T08745
Name
(RefSeq) disease resistance protein RUN1-like
Organism
cill
Carya illinoinensis (pecan)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIR
NB-ARC
TIR_2
NACHT
ATPase_2
LRR_4
nSTAND3
AAA_22
AAA
AAA_16
AAA_14
AAA_24
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
122297027
NCBI-ProteinID:
XP_042962748
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Position
15:complement(45065553..45069103)
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AA seq
722 aa
AA seq
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MTSSMSFRGLSSSSSSTVSSPWFYDVFLSFRGEDTRNTFIAHLHHALLQNGIHTYIDEDE
LRRGGEISPALLQAIENSRLSIIVLSENYASSTWCLDELLNILNCKETKQQIVLPIFYHV
NPSEVRNQRGSFGEALAVCVGKFNEDVKKVQRWKTALQEVANLAGYELENGNESKFIQEI
VQEVSRMVNYSYLNVAKYLVGIESRVQDIDLLLSIGMNDIRMVGIFGVGGIGKTTIAKKI
YNSIFSQFDVHYFLANVRETSNQVGGMVQMQNTLLNEILKASKCFDVGNVDRGVYELKRR
LCSRRVLLILDDVDELVQLETLAGGHDWFGLGSRIIITTRDQNLLNNHKVDSKYEVKRLD
HNEALELFSWHAFEEDKPIEDYVELSKQVIQYAMGLPLALTVLGSDLRGLSINQWRSVLD
KYKRIPSKNIQEVLCISYDGLDDNEKEIFLDIAFFFKGQHLDYVVKILDSCGFSPDNGIK
RLVDKCLITITIHNTLWMHDLLQDMGREIVRKESRKEPGTRSRLWFHEDVRYVLEENAGT
NNVEGIKLVVLPEGDDHDMIRLSPKSFAKMRRLRFFISCGAHFFGRSLNYLSNELRVLDW
SNCPLQSLPSNFRGEKLIDFKLSRGRIKEIGGQFKNLTIMKFSECKFLTKISNLSSCSNL
KELDIMDCENLVEVHDSVGFLDKLVRLRLYQCFNLKSFPRRLKLRSLEVLTLYNCSKLQN
FP
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgacttcttccatgtccttccgtgggctctcttcttcctcctcttctactgttagctct
ccgtggttttacgatgtattcttgagttttagaggagaagatactcgcaatacttttatt
gcccatctccaccatgctttgcttcaaaatggcatccacacctacatagatgaggacgag
cttagaagaggtggtgaaatctcacctgcacttctccaagccattgaaaattcccgactt
tcaattatcgtgctctcagaaaactatgcatcatctacttggtgcttggatgaattgctc
aacattctcaattgcaaggaaacaaagcaacaaatagttttacctatattttaccatgta
aatccatcagaagtacgaaatcaaagaggtagttttggagaagctttggctgtatgtgta
ggaaaattcaacgaagatgtgaagaaggtgcagaggtggaagacagccctacaagaagtg
gccaatttggctggatacgagttggaaaatgggaatgaatcgaaattcatccaagaaatc
gttcaagaggtctctagaatggtaaattattcatatctaaacgttgcaaagtatctagtt
gggatagagtctcgtgtgcaagacattgatttgcttttaagtatcgggatgaatgacata
cgcatggtgggaatatttggtgttggtggaattggtaagacaaccattgccaaaaagatc
tataactcaattttttcacaatttgatgttcattatttcttggcaaatgttagagaaact
tcaaaccaagtgggtggtatggtccaaatgcagaatacactccttaatgagattctaaaa
gcctctaaatgttttgatgttggtaatgttgatagaggagtttatgagttaaagcgcagg
ctttgctctagaagagttctcttaattcttgatgatgtggatgagttagtccagttagaa
acattagctggaggtcacgactggtttggtttaggaagtagaatcatcataactacaaga
gatcagaatttattaaataaccataaagttgattcaaaatatgaagtaaagagattggac
cataatgaagctctcgagctttttagttggcatgcttttgaggaagacaaacctattgaa
gattatgtggaactctctaagcaagtaatacaatatgctatgggtcttccactagcttta
acagtgctaggctcagatctaaggggtctgagtataaatcaatggagaagtgtattggat
aagtataaaagaattcctagcaaaaatattcaagaagtactctgtataagttatgatgga
ttggatgataatgagaaggagattttccttgatattgccttttttttcaaaggacaacac
ctggattatgtcgttaaaatattagatagctgtggtttctctccggacaatggtatcaaa
aggcttgtagataagtgtctcattacaattactattcacaatacattgtggatgcatgac
ttgctacaagatatgggcagagaaattgttcgaaaggaatcacgcaaagaaccaggcaca
cgtagtagattatggtttcatgaagatgttcgctatgtactagaggaaaatgcaggaaca
aacaatgttgaggggataaaattagtggttctgcctgagggtgatgatcatgacatgata
cgcttgagtcccaaatcgtttgcaaagatgagaagactcagattttttataagttgtggt
gcacacttttttggacgatcacttaattatctttctaatgaattaagagtgcttgattgg
tcaaattgtcctttacaatctttgccatccaatttccgtggagagaagctcattgatttt
aaactttctagaggccgtatcaaggagattggcggccaatttaagaacttgacgataatg
aaattttctgagtgtaagttcttaaccaaaatctccaatctttcaagttgctcgaattta
aaggaattggatattatggattgtgaaaatttagttgaagttcatgattctgttggattc
cttgataagcttgttcgtttgcgtctttatcaatgcttcaacctgaagagttttccaagg
cgactcaagttgagatctctagaagtccttacactttataattgctcaaaacttcaaaat
tttccataa
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