Carya illinoinensis (pecan): 122297105
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Entry
122297105 CDS
T08745
Name
(RefSeq) heat shock factor protein HSF30 isoform X1
KO
K09419
heat shock transcription factor, other eukaryote
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cill03000
]
122297105
Transcription factors [BR:
cill03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
122297105
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GFIT
Motif
Pfam:
HSF_DNA-bind
GTP-bdg_M
Motif
Other DBs
NCBI-GeneID:
122297105
NCBI-ProteinID:
XP_042962929
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Position
15:complement(6366855..6369656)
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AA seq
400 aa
AA seq
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MEGVMVKEEETVTCALGSSTSSSSASFSPQPMEGLHDVAPPPFLTKTFDMVEDPSTDSIV
SWSTARNSFVVWDSSKFSTTLLPRYFKHSNFSSFIRQLNTYGFRKVDPDRWEFANEGFLG
GQRHLLKTIKRRRHVGQGLNQQGGGGGGACVELGEYGLEGDLETLRRDKSLLMAEILKLR
QQQQNSREEIIAMEDRLQATERKQQQMMTFLAKALSNPTFIQQFAQRRELRSVEIGRKRR
LTARPSAEDLQEEVVSVTAGSGLDVDHTSQEHDELATMESEIETFLLSSWDNESSSDIKD
PIASLIPTGSGGNLDFVNETIWEELLNEDLISGNAEEEAVVDYQSEIEAEIEDLVAQPAN
WGGLGMGNYEGGVSFTDSHLEDLVTVSSLYMNYLIHYSKL
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagtgatggttaaggaggaagaaacggtgacatgtgctttgggatcatcgacg
tcttcttcgtctgccagcttctcacctcagccaatggaggggctgcacgatgtggcgccg
cctccgtttctgacaaagacctttgatatggtggaagacccttcgacggactcgattgta
tcgtggagcacagctcgcaacagcttcgtcgtttgggactccagcaagttctccaccact
cttcttcctcggtactttaagcacagtaacttctccagcttcattcgccaactcaataca
tatggtttcagaaaggttgatcctgatcgatgggaattcgcaaatgaagggtttctagga
gggcaaaggcatttattgaagaccatcaagcggagaagacatgtcggccaaggtttaaat
caacaaggaggaggaggaggaggagcttgtgtcgaattgggagaatatggcttggaaggc
gatcttgaaacattaaggagagataaaagtttgttaatggcggagattctaaagttgaga
cagcagcaacagaattcgagggaggaaatcattgccatggaggataggttacaagccact
gagaggaaacaacaacagatgatgacttttcttgctaaagcactcagcaacccaaccttc
atccagcaatttgctcagagaagagaactgcgaagtgttgaaataggacgaaagcggagg
ctgactgcacgccccagtgcggaggatttgcaggaagaagtggtgtctgtcacggcaggc
agtggcctggatgtggaccacacaagccaagaacatgacgaattggcgacaatggagtca
gaaatagagacgtttctcttatcttcctgggacaatgaatcgagcagcgatatcaaagac
ccaattgcaagtttaattcccacaggaagtggcggcaatttggattttgtaaacgagaca
atatgggaggagctactgaatgaagatttgatttctggaaatgcagaagaagaagctgtg
gtggattatcaatcagaaatcgaagcagaaatagaggatttggttgcacaaccagccaac
tggggcggactgggcatgggaaattacgaaggaggggtttccttcactgattcacatctc
gaagatttagttacagtctccagcttatatatgaattatttgatccattactccaagctt
tag
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