Carya illinoinensis (pecan): 122297108
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Entry
122297108 CDS
T08745
Name
(RefSeq) protein PIGMENT DEFECTIVE 338, chloroplastic
KO
K02945
small subunit ribosomal protein S1
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
122297108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
cill03011
]
122297108
Ribosome [BR:
cill03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
122297108
Bacteria
122297108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Motif
Other DBs
NCBI-GeneID:
122297108
NCBI-ProteinID:
XP_042962938
LinkDB
All DBs
Position
15:complement(1869445..1876135)
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AA seq
531 aa
AA seq
DB search
MTILLQPCKSLCSPYYSLPVNNFTVVCNTVQNKACPSIPKWPAVKPSKFHFFSTLGPFQN
LGFSNHSPSRRGTHVASCSRNEVFDGFSSTQLPQKPESKDVKGNEELELLNKPSPKPINN
GVSSELDKECEKPGKEEALEPFLKFFKGRDDEAEVKEEAGVLEEKVDVDDKYEKVNKVGV
EYYEPKPGDFVVGVVVSGNENKLDLNVGADLLGTMLTKEVLPLYDKEMEYLLCDMDKDAS
EFMFRGKMGIVKNDEALGRGSAPGRPVVETGTVLFAEVLGRTLSGRPLLSTRRFFRRISW
HRVRQIKQLNEPIEVKITEWNTGGLLTRIEGLRAFLPKAELLNRVNNFSELKENVGRRKY
VQITRIDETKNDLILSEREAWEKLYLSEGTLLEGTVKKIFPYGAQIRIGETNRSGLLHIS
NITRGRITSVSDLLAVDEKVKVLVAKSMFPDKISLSIADLESEPGLFVSNKEKVFAEAAV
MAKKYREKLPAGLAPYKSELYPTNALPFDNEAIMYANWKWFKFEREDGPAT
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgacaattctacttcaaccttgtaagtccctttgttccccctactatagtttaccggta
aacaatttcacggttgtatgcaacactgtccaaaacaaagcatgtccaagcataccgaaa
tggccagctgtaaaaccatccaaatttcacttcttttccactttagggccctttcaaaat
ctgggattttctaatcattctccaagcaggagaggtacccatgttgcttcttgctctagg
aatgaggtttttgatggtttttcaagtacccagttgccccaaaagcccgaaagtaaagat
gttaaagggaatgaggagcttgaattgctaaataagccttccccaaagcctataaataat
ggggtttcctcagaattagacaaggaatgtgaaaaacctggtaaagaggaggccttagag
cctttcttgaagttttttaagggaagagatgatgaggctgaagtgaaagaagaggcaggt
gtgttagaagagaaagttgatgtagatgataaatatgagaaggttaataaagtcggggtt
gagtactatgagcccaaacccggtgattttgtggtgggggtggtagtttctggtaatgag
aataagcttgatttgaatgtgggagcggacttgctgggtacaatgttgacaaaggaggtg
ctccccttgtatgacaaggagatggaatacttgttatgtgatatggataaggatgccagt
gagtttatgtttcgcggaaagatgggcattgtgaagaatgatgaagcattgggcagggga
tcagcgccgggaagacctgttgtggagactggaactgttttatttgcagaggttcttggg
agaactcttagtggtaggccgttgctttcaactagacgattcttccggcggatttcttgg
caccgagtgaggcagataaagcaactcaatgaacctattgaggtgaaaataacagagtgg
aacacggggggccttcttacaagaattgagggattacgagcttttcttcccaaagctgag
ttattgaatagagttaacaacttctctgagttgaaagaaaatgttggacggcggaaatat
gtgcagatcactcgtatagatgagactaaaaatgacctaatattaagtgagagggaagct
tgggaaaaattataccttagtgagggaacgcttttagaaggaactgttaaaaaaatattc
ccatatggagctcaaataaggataggcgaaactaacagaagtgggttactgcatatttca
aacatcacccgtggtcgaattacttctgtcagcgacttacttgcagttgatgagaaggtt
aaagttcttgttgcaaagtcgatgtttcctgacaaaatatctctaagtattgctgacctt
gaaagtgagcccgggctatttgtatcaaacaaggagaaagtatttgctgaggctgcagtg
atggcaaagaagtatagggaaaagctacctgccggtttagccccttataagtcagagctt
tatccaaccaatgctttaccttttgacaacgaagcaattatgtatgcaaattggaaatgg
ttcaagtttgaaagagaagatggtccagctacttaa
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