Carya illinoinensis (pecan): 122297110
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Entry
122297110 CDS
T08745
Name
(RefSeq) YTH domain-containing protein ECT2 isoform X1
KO
K20102
YTH domain-containing family protein
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122297110
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122297110
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
122297110
NCBI-ProteinID:
XP_042962940
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Position
15:28331852..28337190
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AA seq
557 aa
AA seq
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MVKNLKRAADPSMEGADSNLVPLKDTTPQSDATSCISSVGDATSSIKGSEVDHDSLAMDL
GMSYSSSGYYGYYYPGYDCSYGELDNQGYHVGGDGMELQYPVMQADNGSFVYFMPGFQPG
YNPYFPTSTIGVDGQYVDQQAYLPTPMFQPPITSTGYYPSTVPYGKLLPSPYVWDPSLVG
DGYFGNIHAGAPEFPEPKRNLPSPSHGIHNQLKPGNKLFLGFASSSFQSDVVAKGYFPVS
KPSAHNQGKGGMLYSNSPVNLRANARGWGSSEKLKSRSKINGVNDIGLLNEQNQGPRTAN
AKGVLISGGNAAGSLETDGNGNSNSISSFVRMDQYNLPDFPTKYDHAFFFVIKSYSEDDI
HKSIKYNVWASTPNGNKRLESAYQDAQERMVDKGSKCPVFLFFSVNASGQFCGIAEMIGQ
VDYNKNMDFWQQDKWNGYFPVKWHIIKDVPNPLLRHIILENNENKPVTNSRDTQEVRFPQ
GIEMLIIFKNYVSKTSILDDFDFYENRQKVIQEKRTGEFIPHYNLQKIDELTTSFKTVDL
SATKSIRQPEVEIKVKK
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaaaatctgaaaagagctgctgatccttctatggagggcgctgattccaatctg
gttcctttgaaagacacaactccacaatctgatgcaacatcatgtatatcatctgtggga
gacgcaacaagtagcatcaaaggaagtgaagttgaccatgattccctcgctatggatcta
ggcatgtcttattcaagcagtggctattacgggtactattatccaggttatgattgttcc
tatggagagttggacaaccaagggtaccatgttggtggtgacggaatggaacttcaatat
cctgttatgcaagcagataatgggtcttttgtctacttcatgccaggatttcagcctggt
tacaatccatattttcccacatctacaattggcgttgatggtcaatatgtcgatcaacag
gcatatctgccaacccccatgtttcaaccaccaatcacctcaactggatattatcccagt
actgttccttatgggaagttgctaccatcaccctacgtgtgggatccatcccttgttgga
gatggatattttggaaatatccatgcaggagctccagaatttccagagccaaaacgcaat
ttgccttccccaagtcacggcatccacaatcaactaaaaccagggaacaagttattttta
ggctttgcctcgtcatcttttcagtcagatgtagttgccaaaggctactttcccgtttca
aaaccttcagcccataatcaagggaagggtggaatgctatactcaaacagtccagtcaat
ttaagagcaaatgcaaggggttggggaagcagtgagaagctgaaatcaagaagcaaaatt
aatggtgttaacgatattggtttgctaaatgagcagaaccagggtcctagaacggccaat
gcaaaaggtgttttgatttctggaggtaatgctgctggatccctggaaactgatgggaat
ggaaatagtaacagcatatcctcttttgtcaggatggaccaatataaccttcctgacttt
ccgaccaaatatgatcatgcatttttctttgttatcaaatcttacagtgaagatgatatt
cataagagcatcaagtacaatgtgtgggctagtactcctaatgggaataagaggttagag
agtgcatatcaagatgcccaagagaggatggttgataaaggcagcaagtgcccggtgttt
cttttcttttcggttaatgcaagtggtcagttctgtggaatagctgagatgattggccaa
gttgattataataagaacatggatttctggcagcaagataagtggaatggttattttcct
gttaagtggcacattataaaagacgttccaaatccgcttttacgacatataatacttgag
aataatgagaacaagcctgttaccaacagtcgagatacccaggaggtgagatttcctcag
ggtattgaaatgttgattatttttaaaaactatgtgtcaaagacgtccatattggatgat
tttgacttctatgaaaaccgccagaaggtgatacaagagaagaggacgggagaatttata
ccccattataatctgcagaagatagatgaattaaccacgagttttaagacggtagatctg
tctgccacgaagagcatcaggcaacctgaggtcgaaatcaaggtgaagaaatga
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