Carya illinoinensis (pecan): 122297157
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Entry
122297157 CDS
T08745
Name
(RefSeq) eukaryotic translation initiation factor 5B-like isoform X1
KO
K03243
translation initiation factor 5B
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
cill03012
]
122297157
Translation factors [BR:
cill03012
]
Eukaryotic type
Initiation factors
eIF-5
122297157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
GTP_EFTU_D4
GTP_EFTU_D2
MMR_HSR1
ATP_bind_1
Roc
Motif
Other DBs
NCBI-GeneID:
122297157
NCBI-ProteinID:
XP_042963002
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All DBs
Position
15:2416027..2437572
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AA seq
1377 aa
AA seq
DB search
MGRKKPTARGDDESAPAAVSKSKKKAILIDDDEYSIGVELSEEPEVQENVVITGKKKGKR
GGAKTAKPKDDEDEDTENEGDEVSEIVFTGKKKGKSKKGGGTSVFSASGFGLLGEDDDEG
EDGRSGLNGDKDGEDDDEKLVSFSGKKKKKLSKDSNKSGGSLFNASAFDAIDDDDVGGYE
GEEVDNSVGETKIKDDDDEDEQVIAFTGKKKKSSKGKGGNKGGGGGSSVFTTSGFDRLDD
GDEERGEKKEEDGDVAPNTFSGKKKKSSKKTGGSFLSVALADEENDDDASASGVTRAVDD
AVGDEDVSAFAFMGKKKSSKKKSNSVSTELGEESEVRDVGEPEQPRAGTNNVEADNSKVN
RSEEVKETSKNKKKKKKSGRTAEEEDDLDKILAELSLGPSLSKPAAPPQEEKIEVQSESV
TLAEEKEGEEEESVESTAAKKKKKKKEKEKEKKAAAAAATVSEVKDEKQDETITELTEPR
KNEAKSRAADKKVPKHVREMQEALARRKEAEERKKREEEERLRKEEEELRKQEELERLAE
EAKRRKKEKEKEKLQRKKAEGKLLTTRQREEARRLEAMRNQILANAGVFPPSTDTVAQTK
RPKYQNKKKPTHHQTNGADPEKAVENVEVTEEPQETLTKMDSIDSEKVDEESMDVEEKSE
LAETVEENGMEEDDDEDEWDAKSWDDVAVNLSIKSAFADEEAEPESVKKVKGTIPNSHIA
APPATSKPAVAVKKTTPSQPIASPNLENKKKQEAEVLDKNKRKDVSLKKEASSSDATSKP
SEDNLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTKE
LKADAKLKVPGLLVIDTPGHESFTNLRSRGSGLCDIAILVVDIMHGLEPQTIESLNLLKM
RNTEFIVALNKVDRLYGWKTCRNAPIVKTMKQQSKDVQNEFNMRVTQIVTQFKEQGLNTE
LYYKNKEMGETFSIVPTSAISGEGIPDLLLLLVQWTQKTMVEKLTYSNEVQCTVLEVKVI
EGHGTTIDVVLVNGVLHEGDQIVVCGMQGPIVATIRALLTPHPMKELRVKGTYLHHKEIK
AAMGIKISAQGLEHAIAGTGLYVVGPDDDLEDVKEAAMEDMKSVMSRIDRSGEGVYVQAS
TLGSLEALLEFLKSPAVNIPVSGIGIGPVHKKDVMKASVMLEKKREYATILAFDIKLMPD
AEELAKDLGVTIFQADIIYHLFDQFKAYIDNLKEEKKKEAADDAVFPCVLKILPNCIFNK
KDPIVLGVDILEGIAKVGTPICIPQRDFIDIGRISSIENNHKPVDIAKKGQKVAIKILGT
NPEEQQKMFGRHFELDDELVSHISRKSIDVLKANYRDDLSIEEWKLVVKLKTLFKIQ
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgaaagaagccgaccgctcgtggggacgacgagagcgcccctgctgctgtgtcg
aaatcgaagaagaaggcgatcctcattgacgacgacgagtactccatcggagttgagctg
tccgaggagccggaggttcaagagaatgttgtaattactgggaagaagaagggtaagagg
gggggcgcaaaaactgcgaagcccaaggacgatgaggatgaagatactgaaaatgaaggg
gacgaagtttccgagatagtgtttactgggaagaagaaagggaagtcgaagaagggcggt
gggaccagtgtgtttagcgcgtctggtttcgggttgttgggagaggatgatgatgagggg
gaggatggacggtccggactaaatggtgataaagatggtgaggatgatgatgaaaaattg
gtgagcttttcggggaagaagaagaagaagctgtccaaggactcaaacaagagtggtggt
agtttgtttaatgcatcagcatttgatgccatagatgatgatgatgttgggggatacgaa
ggtgaggaggtggataattctgtgggagagactaagatcaaggatgatgatgatgaggat
gagcaggtaattgcttttacagggaagaaaaagaagtcatccaaaggtaaaggtggaaac
aaaggtggtggtggtggtagtagcgtgtttacaacttctggttttgataggcttgatgat
ggggatgaggagaggggtgagaaaaaagaagaggatggagatgttgctccgaatactttc
tcaggtaagaaaaagaagtcttcgaagaagaccggtggtagtttcttgagtgttgcgttg
gctgatgaggagaatgatgatgatgcttctgcctctggggttaccagagctgttgatgat
gctgttggggatgaagatgtctcagcattcgcatttatgggtaagaagaagtcttcaaag
aaaaagagtaatagtgtttctaccgaactgggagaagaatctgaagtcagggatgtaggt
gaacctgaacaaccaagggcgggaactaataatgtggaagctgataattctaaagttaac
agaagtgaagaggtgaaggaaacttctaaaaacaaaaagaagaagaagaagagtggaagg
acagctgaagaggaggatgatttggataagattcttgcagagctcagtctggggccttct
ctatcaaagccggctgctcctccacaagaggagaaaattgaggttcagtctgaatcagtt
actttggctgaagagaaggaaggtgaagaagaagagagtgtggagtctactgctgcaaag
aagaagaagaagaagaaggagaaggaaaaggagaagaaggcagcagcagccgctgccacc
gtttcagaggtgaaggatgaaaagcaggatgaaactattactgaattgacagagccaaga
aaaaacgaggctaagagtagagctgcagacaagaaagtgccaaaacatgttagagagatg
caagaagcacttgctcgtaggaaagaggctgaagagaggaagaaaagggaagaagaggag
aggttgaggaaggaagaggaggagctgcggaagcaggaagaacttgagaggctagcagaa
gaagctaagcgcagaaagaaggaaaaggaaaaagagaaactgcagagaaaaaaagcagaa
ggaaagcttttgaccacgaggcagcgggaagaagccagaaggttggaagcaatgaggaac
cagatactggctaatgcaggggtgtttcccccttctacagacaccgttgcacaaactaaa
cgtcccaagtatcagaataagaagaaaccaactcaccatcaaacaaatggtgctgaccct
gagaaggcagtggaaaatgttgaggtgacggaagaaccacaagagactctgaccaagatg
gatagcatagattcagagaaagttgatgaggagtcaatggatgtggaggagaaatctgaa
ctggctgagactgttgaagagaatggaatggaagaagatgatgatgaggatgaatgggat
gcaaagagctgggatgatgttgctgttaatctatctattaaaagtgcatttgccgatgaa
gaggctgagcctgaatcggttaaaaaagtgaaaggtactattccaaattctcacattgcc
gcacctcctgcaacttccaagccagcagttgctgttaagaaaaccactccttcccagcca
atagcatctccaaatcttgagaacaagaaaaaacaggaggctgaagttttggacaaaaat
aagagaaaagatgtctccttgaaaaaagaagcttcaagttcagatgctacctccaaacca
agtgaagataaccttcgttccccaatttgctgcatcatgggtcatgtcgatactggtaaa
accaagttactggattgtatccggggtactaatgttcaggaaggtgaagctggaggtatc
actcaacaaattggtgcaacctattttcctgctgagaacatacgtgagagaaccaaggaa
ctgaaagctgatgctaagctgaaggtcccaggtctattggttattgatacccctgggcac
gagtcatttactaatttaaggtcacggggttcaggtttatgtgatattgcaattttggtt
gtcgacattatgcatggcttggagccacaaacaatagaatcacttaaccttttaaaaatg
aggaatacagaattcattgttgcattgaataaggtggacaggctttatggctggaaaaca
tgtcgcaatgcgccaattgtaaagaccatgaagcaacaatctaaggatgtacaaaatgaa
ttcaatatgagggtcactcagattgtaactcagttcaaggagcaaggtttaaatactgaa
ttgtattataaaaataaggaaatgggggaaacttttagcattgttcctacaagtgctatt
agtggtgaaggcatcccagatttgttactattattggttcaatggactcagaaaactatg
gttgagaaacttacatatagcaatgaagtgcagtgtaccgtgttggaagtcaaggtcatt
gaaggccatgggacaactattgatgttgtattagtcaatggagtgcttcatgaaggagat
caaatagttgtttgtggcatgcagggacctattgttgccacaattcgagctttattgacg
ccccatccaatgaaggaacttcgagttaaggggacttatcttcatcataaggaaatcaag
gctgcaatgggtatcaaaattagtgcacagggccttgagcatgctattgctggtactggt
ctgtatgttgtagggccagatgatgatttagaggatgttaaggaagcagccatggaagat
atgaagtcggtcatgagcaggattgacaggagtggtgagggagtttatgtacaagcatct
actttaggctcattggaagcattgctggagtttttgaagtccccagctgtaaacattcct
gttagtggcataggcatagggccggtacataaaaaggatgtcatgaaggccagtgtaatg
cttgaaaagaaaagggaatatgctactatcttggcctttgacatcaaacttatgccggat
gctgaggaacttgcaaaggacttgggtgtgactatttttcaggctgatatcatttatcac
ttattcgatcaatttaaggcctatattgacaatcttaaggaggaaaagaagaaggaggct
gctgatgatgcagtcttcccatgtgtgcttaaaatattaccaaactgcattttcaacaag
aaggatccaattgtgttgggggttgatatacttgaaggcattgctaaggttggtactccg
atttgtattccacagcgggatttcattgatattggacgaatttcatccattgaaaataat
cataaacctgtggatattgcaaagaaagggcagaaagttgcgataaagatacttggcaca
aatcccgaggagcagcaaaagatgtttggtagacactttgagcttgatgatgagcttgtc
agtcacatctcacgaaaatcaattgatgtacttaaagctaattacagggatgatctgtca
attgaggagtggaaactggttgtgaaattgaagactcttttcaagatacaatga
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