Carya illinoinensis (pecan): 122297172
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Entry
122297172 CDS
T08745
Name
(RefSeq) nucleolar protein 6
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122297172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cill03009
]
122297172
Ribosome biogenesis [BR:
cill03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
122297172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D5
Nrap_D4
Nrap_D3
Nrap_D2
Nrap
Nrap_D6
Ig_CFAP74_1st
Motif
Other DBs
NCBI-GeneID:
122297172
NCBI-ProteinID:
XP_042963062
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All DBs
Position
2:complement(3274120..3290450)
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AA seq
1046 aa
AA seq
DB search
MDLKVRELLKEVRLNYSPAFTKLVDDTVTAIKDTIDKIPEDLLVTADEASGFVRDIGADK
VEFKFKKPKSINAGGSYAMQCMVKPDINVDLFIQLPTECFHEKDYLNHRYHAKRCLYLCI
IKKYLKLSSLVRKVEWSTLQNEARKPLLLAYPAMELVEVPEFFVRIIPTAKSLFDIKKLN
LKRNNVRALNHGGIPQATPKYNSSILEDMFLEDSEELNRKNLSGKKEFGEASILLKVWAR
QRSSIYGHDCLNGFILSVILSYLASQNKINASMKAMEIFRVTLSFIASSELWSRGLYFKQ
EGQKAIPKEERMPYKDTFPVVICNPSAAFNLAFRISRIGFIELQDEAALTLTCLEKCRDG
GFEEIFMTKVDYASKYDYCMRLNLKGKSEVHASGFCMDDECWRLYEQKVHTLLNQGFSDR
AKMIRVTWRNTFSGCSIENGLSIFDREPLLVGVSVSSLEKAFRVVDIGPDAENKNEALKF
RMFWGEKAELRRFKDGKIAESTVWESEQWTRHLILKRISEYVLVRHLSVTKENIVHVVDQ
LDFSLLHGVNDPVSFSGSLLGALEVLTKRLGLIQDIPLKVSSVQPIDPAFRFTSVFPPEP
HPLVIDKGDVPRTHKLLSSRIQPLEVMIQLEGSGNWPMDDLAIEKTKIAFLLKIGESLQN
SWGMKCTATEDDVDVFMSGYVFRLRILHERGLSLVKREIGSDQVKQVTSADKKLFVRSQH
SSMINGLQGRYLIYAPVVRLAKRWVASHLFSACLVEEAVELLVAYIFLKSLPFNNAPCSR
ITGFLRFLRLLSEYDWTFSTLIVDINDDLSINDVKEISDNFMLSRKASEEKKQNVSAAMF
LATAYDKASEAWTRFSPNSSDLKRLVAYARSSANLLTKLISQEQNDSYKWECLFRTPLNN
YDAVILLHRDKLPYPQRILFPSELNQGKHVARGNASKSFHPLMLPRDLKGSSEEVKKKLL
VDFDPLRCFVEDLENEFSSTFKVWYDSLGGDAVGITWKSFSSKKRGREEAGEEGKEDPVD
VLKAVGEVGKGFVRSVYFLKAPRLMN
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atggacttgaaagtgagggagctcctcaaggaggtccggctcaactactcgcctgccttc
accaagctcgttgacgacacagttacggccatcaaagacaccattgataaaattcctgaa
gacttgctggttacagcggatgaagcttctggttttgtccgggacattggtgcggacaaa
gttgagttcaagtttaagaagccaaaatctatcaatgctggtgggagttatgcaatgcaa
tgcatggtgaagcctgatataaatgtcgatctttttattcagttgccaacggagtgtttt
catgagaaagattatttgaatcatcggtaccatgccaaacgatgcctatacctttgtata
atcaagaagtacttgaagttatcttcattagttcgcaaggttgaatggtctaccctacaa
aatgaggctagaaaacctttattacttgcctatccagctatggagcttgttgaagttcct
gagttttttgtaaggataatccctacagcaaaatcactgtttgacatcaagaaattgaac
ctaaagcggaataatgtccgtgccctgaatcatgggggtattcctcaggctacaccgaaa
tacaatagtagtattttggaagacatgtttttagaggatagtgaagaacttaataggaaa
aatctttcgggaaaaaaggagtttggagaagcttcaattttattgaaggtttgggctcgg
caaagaagttcaatatatggtcatgattgcctaaatggatttatactttctgtgatattg
tcgtaccttgctagtcagaacaagattaacgcttctatgaaggcaatggagatatttcgt
gttaccttgagcttcattgcctcttcagaattatggagccgtgggctctacttcaagcag
gaagggcagaaggctattccaaaggaggaaaggatgccgtataaagatacttttccagtt
gttatatgtaatccatcagcagccttcaatctagcattccgcatatcaaggattggtttc
attgagctccaagatgaagctgctttgacacttacatgcttagagaaatgcagagatggt
ggatttgaggagatttttatgaccaaggttgactatgcttctaaatatgactattgtatg
agattgaacttgaaggggaaaagtgaggttcatgcatcgggattttgcatggatgatgaa
tgttggaggctatatgagcagaaggtgcatactcttctgaatcaggggttcagtgataga
gcaaaaatgattcgtgtaacatggagaaacacattttcaggatgcagtattgaaaatggc
ttatcaatatttgatagagagccattactcgttggagtttcagtgagctctttggagaaa
gcttttagggtggttgatattggtccagatgctgaaaataagaatgaggctctcaaattc
cggatgttttggggggagaaggctgagcttaggagatttaaagacggtaaaattgcagaa
agcacagtatgggaaagtgagcagtggacaagacatctcattttgaaaagaatttctgag
tatgtgcttgtgcggcatctttccgtaacaaaggagaatattgtgcatgtggtggatcag
cttgatttctcactgcttcatggtgttaatgatcctgtatcattttctggaagtttgctt
ggagcacttgaagttttaacaaagcgcctaggtcttatccaagacattccgttgaaggtt
tctagtgtgcagccaatcgacccagctttcaggtttacctctgtcttccctcccgaacct
catccgttggttattgacaagggtgatgttccgaggacacataagttactgtcatcacgt
attcagcctctggaagttatgattcagttggaaggttctgggaattggccaatggatgac
ttagcaattgaaaaaactaaaattgctttccttcttaagattggtgagagtcttcagaat
tcctgggggatgaaatgtactgctactgaagatgatgtggatgtttttatgtctggatac
gtatttcgtcttagaatattgcatgagagaggcctgagtttggtgaaaagggaaattgga
agtgaccaagttaagcaggtcacttctgcagacaagaaactttttgttcgtagtcagcat
tctagcatgattaatggattacagggtcgttacctgatatatgctcctgttgttaggctt
gcaaaacgatgggttgcttcacatcttttttcagcttgcttggtagaagaggctgttgag
ctgttggtagcttacatctttttaaagtccttaccattcaataatgctccttgctcccgc
ataactggatttctaaggttcctacgattactgtcagagtatgactggaccttttctact
ctgattgttgacataaatgatgacttgagcataaatgatgtgaaagagattagtgataac
tttatgttgagtagaaaagcttccgaagaaaagaaacaaaatgtaagtgcagcaatgttt
ctggctacagcttatgacaaagcatctgaggcttggaccagattttccccaaattcatcg
gatctgaaacgattggtggcttatgctcgaagcagtgcaaacttgttgaccaaactcata
tcacaggagcagaacgattcttataagtgggaatgccttttccgaactcctttgaacaac
tatgatgctgtaattcttctccacagggacaaattaccttatccccaacgtattctcttt
ccttcagaactaaaccaagggaagcatgttgcccgtggtaatgctagcaagtctttccac
cctttgatgttgcccagagacttaaaggggagctcagaggaagttaaaaagaagttatta
gtggactttgatccattgaggtgctttgtcgaggatttagagaatgagttctccagcacg
ttcaaggtatggtatgattctctgggaggtgatgctgttggcataacgtggaagagcttt
tcttccaagaaacgtggccgggaggaagcaggcgaggaaggaaaagaagatccagttgat
gtgttaaaagctgttggtgaagttggcaaaggatttgtcagaagtgtttatttcctgaag
gcaccaaggcttatgaattaa
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