Carya illinoinensis (pecan): 122297257
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Entry
122297257 CDS
T08745
Name
(RefSeq) peroxisome biogenesis factor 10 isoform X1
KO
K13346
peroxin-10
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
122297257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cill04121
]
122297257
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
122297257
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-RING_2
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_4
RING_XB3-XBAT31
zf-RING_5
Prok-RING_4
zf-RING_6
zf-ANAPC11
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
122297257
NCBI-ProteinID:
XP_042963196
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Position
15:complement(23838042..23852559)
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AA seq
401 aa
AA seq
DB search
MGLGREEAPGSRDPGSSGQSGRSSREGSIPRRFPLAAQPEIMRAAEKDDQYASFVYEACR
DAFRHLFGTRVAVAYQSEQTKLLGQMLYFILTTGSGQQTLGEEYCDITQVSGPYGLPPTP
ARRALFILYQTAVPYIAERISSRAASHGIVLADSQSDDAYNDNAPGSGHVQSLVETHLSS
STSRGSISFVRRLKENLNRLWLFAVQRWPTVLPIAREFLQLVLRANLMFFYFEGLYYHIS
KRAAGIRYVFIGKPSNQRPRYQLLGVFLLIQLCIIAAEGLRRSNLSSIASSVHQTSFGTH
RGSTVQGLPVLNEEGNLISADNNKGSWVSDSSSTSESQAMTGGTSKCTLCLSNRQYPTAT
ACGHVFCWNCIMEWCNEKPECPLCRTPITHSSLVCLYHSDF
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgggattggggagggaggaggcacccggttcacgggacccggggtccagtgggcagtcg
ggtcggagcagcagagaagggtccataccacgaaggttcccactggcggcacagccggag
ataatgagagccgcggagaaggacgaccagtacgcctccttcgtctacgaggcctgtcgc
gacgcttttcgccacctctttggtacaagggttgctgtagcttatcagagcgagcagaca
aaactattagggcagatgctgtattttatattaacaactggttcaggccagcaaacactg
ggagaggaatactgtgacatcactcaggtttcaggaccttatggacttcctccaacccca
gcaagacgtgctctcttcattttataccagacagcagttccttatattgcagaacgaatt
agttccagagctgcttcccatggaattgttcttgctgattcacagtctgatgatgcctac
aatgacaatgctccaggaagtggccatgttcaatctttggtagagacgcatctttcatcc
tctacatcacgagggtccatttcttttgtgagaaggttgaaagagaatctcaatagatta
tggttgtttgcagttcaaagatggcctacggtgctccctatagctcgggaatttttgcaa
ttggttcttcgtgctaacctcatgttcttctactttgaaggcctctattatcatatatca
aaacgtgcagcaggcattcgttatgtgttcattggaaaaccatcaaatcaaaggccaaga
taccaattactaggagtatttctactgattcagctctgtatcattgctgctgaaggattg
cggcgtagcaatttatcatctattgcaagttcagtgcaccagacatcctttgggacccat
cgaggttcaacagtgcaaggtttgcctgttttaaatgaggaaggcaacttgatatctgca
gataataacaaaggaagttgggtatcggattcttcttcaacgtctgagtcccaagcaatg
actggcgggactagcaaatgcacactctgcctgagtaatcgccaatacccaacggccacg
gcttgtggtcacgtattctgctggaactgcatcatggaatggtgcaatgagaagcctgaa
tgccctctttgtcggacccccataactcattcaagcctagtttgcttatatcattcggac
ttctag
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