KEGG   Carya illinoinensis (pecan): 122297481
Entry
122297481         CDS       T08745                                 
Name
(RefSeq) DNA cross-link repair protein SNM1 isoform X1
  KO
K15340  DNA cross-link repair 1A protein
Organism
cill  Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:cill00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cill03400]
    122297481
DNA repair and recombination proteins [BR:cill03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Nucleases
    122297481
SSDB
Motif
Pfam: DRMBL SAM_1 SAM_2 Lactamase_B_2 La Lactamase_B
Other DBs
NCBI-GeneID: 122297481
NCBI-ProteinID: XP_042963475
LinkDB
Position
15:complement(24498367..24505220)
AA seq 734 aa
MASRSETFATLDDDDDNDFQIPLAQTTTTSTHSCRSLISSRRPLKSSNSNFYSSKKLKRT
GKENVPESTSSAHVKESQSDTPSLPNPTLPALDARQNIKVDNDSSALDCDAKRELLKTRE
GYLCNSVESRLMNSRVDFAVNDDFEVGPELDVLLNLSSDVEEGDRNVVNGEAFHPQERNG
LDGDGVFVQIRCPLCGIDISGMSNVQRQIHSNDCLDKGEAQVQDITVPSDESEPQIHRPI
VDISPVLEWVRSLGLERYGDIFAREEIDWDTLQWLTEEDLFGIGITALGPRKKIMHALSE
HRKGSANVVETHSDMHTYSEPQRQSTNGVQTYNDASDITVDETKKLAVNKLITDYFPGSV
TDGKKVNTSVGKGGLGKRCSDSGLKHAVAKNIFRNGKLKDVPSWCCISGTPFRVDAFRYL
RGDCSHWFLTHFHMDHYQGLTRSFCHGKIYCSSITATLVNIKIGIPWDRLQILQLNQKIN
IAGVDVTCLDANHCPGSIMILFEPPNGKAILHTGDFRFCQEMTSMPVLQSRPIHTLILDT
TYCNPQYDFPKQEAVIQFVIDCIQAEAFNPKTLFLIGSYTIGKERLFLEVARVLRKKVYV
TAAKLHILRCLGFSEEDMQWFTVNEQESHIHVVPMWTLASFKRLKHISDQYVGRFSLIVA
FSPTGWTFGKGKKKSPGRRWQQGTVIRYEVPYSEHCSFTELRDFFKLVSPMNVIPSVNND
GPDSANAMISLLSS
NT seq 2205 nt   +upstreamnt  +downstreamnt
atggcatctcgctctgaaacctttgcaacactggacgatgacgacgacaacgacttccag
atccctctcgcccaaacaacgactacaagcacccattcttgcagatctctcatcagctct
cgtagacctctcaagtcctccaattccaacttctactcatccaagaaactgaagcgcacc
ggcaaagagaacgtgccggaatccacctcctcggcccacgttaaggaatcacaatccgat
acgccatcgttgcccaatcccacgcttcctgcccttgatgcgcgtcaaaatatcaaggta
gacaatgattcaagtgctttggattgtgatgctaaaagggaattgttgaaaacaagagag
ggttatttatgcaattcagtggagtctaggttaatgaattcgagagtggatttcgctgtc
aatgatgattttgaggtgggtccggagctcgatgtgctgctcaacttgtcttctgatgta
gaggagggggatagaaatgttgttaatggcgaagcctttcatccacaggaaagaaatggc
ttagatggtgatggagtttttgttcaaattcgatgtccgctatgtggaattgacatctct
ggcatgagtaatgtacaacgtcagatacactccaatgactgtctggacaaaggggaagct
caagttcaagatattactgttccttctgatgaaagcgagcctcaaattcatcgtccaatt
gttgacatctctcctgttcttgagtgggttcgcagtttaggtttagaaaggtatggggat
atttttgcccgagaagagattgattgggacaccttacaatggctgacagaagaggatctg
ttcggtatcggtatcactgcactgggtccaaggaagaagattatgcatgctcttagtgaa
catagaaaaggaagtgctaatgttgttgaaacacattctgatatgcatacctactctgag
cctcaaagacagagcaccaatggagttcaaacttacaatgatgcttcggatataacagtg
gatgaaactaaaaagttagctgtaaataagttgattacagattattttccagggtctgtg
actgatgggaagaaagttaacacctctgtggggaagggagggttaggaaaaagatgctct
gattctggccttaaacatgctgtggcgaaaaatattttcagaaatggcaaactcaaggat
gttccctcgtggtgctgcatatcaggaacaccatttcgagtggatgcttttcgatatctt
agaggagactgttcccattggtttctcactcattttcatatggaccattatcaaggtcta
acaagatccttctgtcatggaaagatttattgctcctcgatcacagctacgcttgtgaat
ataaagattgggatcccatgggacagattgcaaattttacagctcaaccaaaaaatcaat
attgctggtgttgatgtgacctgcttggatgcaaaccactgtcctggttccataatgata
ctttttgaaccacccaatggtaaggctattctacatacaggggattttcgcttttgtcag
gaaatgactagcatgcctgttttgcaatcacgtcctatccatactcttatccttgacacc
acttactgtaacccccagtatgactttccaaagcaagaggctgtaattcagttcgtcatt
gattgcattcaagctgaagctttcaaccctaaaacactttttctgatcggtagctacaca
attggaaaggagcggctgtttttggaggttgctcgtgtactccgtaaaaaggtttacgtc
accgcagcaaaactgcatattttaagatgtttgggattctcagaggaggacatgcagtgg
tttacagtgaatgaacaagaaagccacattcatgttgtgccaatgtggacacttgcgagc
ttcaaacgtctaaagcacatatctgatcaatatgtgggtcgattcagtctcatagttgct
ttctcccctactgggtggacatttggtaaaggaaagaagaagtctccggggagaaggtgg
cagcagggtacggttataaggtatgaagtgccgtacagtgagcattgcagctttacagaa
ctcagagatttttttaagcttgtatctccgatgaatgtaataccaagcgtaaataatgat
ggtcctgattctgccaatgcaatgatctctctcctgtcatcttga

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