KEGG   Carya illinoinensis (pecan): 122297628
Entry
122297628         CDS       T08745                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4-like
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
cill  Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:cill00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cill04121]
    122297628
Enzymes [BR:cill01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     122297628
Ubiquitin system [BR:cill04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    122297628
SSDB
Motif
Pfam: zf-C3HC4_2 zf-RING_2 zf-C3HC4 zf-C3HC4_3 zf-RING_UBOX zf-RING_5 zf-RING_10 zf-C3HC4_4 zf-rbx1 Zn_ribbon_6 zf-RING_6 zf-RING_4 zf-Nse zf-P11 zf-ANAPC11 Prok-RING_4 TRAF3_RING Sina_RING Rtf2 DZR_2 Zn_ribbon_19
Other DBs
NCBI-GeneID: 122297628
NCBI-ProteinID: XP_042963676
LinkDB
Position
2:3935134..3941754
AA seq 211 aa
MSSQAARGAPVRGNRQRNMVLDLDLNMAPPNENQDLEGPSMQVEHNGTQTGPRGRSAPPA
MIDVEAIDDDVVESSPRAFAQARIKSRRNRGRLVVDVDLETRTRVTQKNRDRQRRDLPRQ
TILNCEMYINLASSSNNTGENVTKPPLPPKEPTLTCPICMGPVVEEMSTKCGHIFCKACI
TTAMRMQSKCPTCRKPITINELIRIFLPSSS
NT seq 636 nt   +upstreamnt  +downstreamnt
atgagttctcaggcagccaggggggctcctgtaagagggaatcgtcaaaggaatatggta
ctggatttagacctcaacatggcaccgccaaatgagaatcaggatctggagggcccttca
atgcaagtggagcataatggaactcaaactggcccacgagggcggtctgcaccacctgct
atgattgatgttgaggccattgatgatgatgttgtcgagtcctcaccgagggcttttgct
caagccagaatcaagtccagaaggaataggggaaggcttgtagtggatgtggacctagaa
acaaggactagggttacccagaaaaaccgtgacaggcaaagaagagatctgccccgccaa
acaattttgaattgtgagatgtacataaatttggcaagcagtagcaacaatacgggagag
aatgtgacaaaaccacctttaccaccaaaggagcctacacttacatgtccaatttgtatg
ggcccagtagtagaggaaatgtcgacgaagtgtggtcacatattctgtaaggcttgtatt
acgactgcaatgcgcatgcagagtaaatgccccacttgtaggaaacccatcacaataaac
gagctcattagaatcttcctgccttcaagcagttga

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