KEGG   Carya illinoinensis (pecan): 122297823
Entry
122297823         CDS       T08745                                 
Name
(RefSeq) uncharacterized protein LOC122297823
  KO
K03873  elongin-B
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cill00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    122297823
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cill04121]
    122297823
   03400 DNA repair and recombination proteins [BR:cill03400]
    122297823
Ubiquitin system [BR:cill04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     122297823
   Cul5 complex
     122297823
DNA repair and recombination proteins [BR:cill03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     122297823
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Dsc3_N UBL_UBAC1 Ubiquitin_2 Rad60-SLD_2 Chal_sti_synt_N
Other DBs
NCBI-GeneID: 122297823
NCBI-ProteinID: XP_042963961
LinkDB
Position
15:complement(42351015..42354846)
AA seq 103 aa
MAMYIRVKRIKTTYFIRCDPTETILDIKEKLHVLIEQPVINQRLILVGTGEVLEDSKTLA
DQKVENDAVVALTLRKDDNEFEEVNIVRPNDFYQSRDGDGGNW
NT seq 312 nt   +upstreamnt  +downstreamnt
atggctatgtatatccgtgttaagcgtatcaagacaacttactttattcgatgtgatccg
actgaaacaattctagacataaaggagaaattgcatgtcctcattgaacaaccagttatc
aatcagcgtttaatcctagttggtaccggggaagtattagaggattcaaagacattggca
gatcagaaggttgaaaatgatgcagttgtggcactgaccttgagaaaagatgataatgag
tttgaggaggtgaacattgtacggccaaacgacttctatcaatctcgtgatggagatggt
ggcaattggtaa

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