KEGG   Carya illinoinensis (pecan): 122298374
Entry
122298374         CDS       T08745                                 
Name
(RefSeq) ras-related protein Rab7 isoform X1
  KO
K07897  Ras-related protein Rab-7A
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill04142  Lysosome biogenesis
cill04144  Endocytosis
cill04145  Phagosome
cill04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:cill00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    122298374
   04145 Phagosome
    122298374
   04142 Lysosome biogenesis
    122298374
   04148 Efferocytosis
    122298374
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cill04131]
    122298374
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cill04147]
    122298374
   04031 GTP-binding proteins [BR:cill04031]
    122298374
Membrane trafficking [BR:cill04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    122298374
Exosome [BR:cill04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   122298374
  Exosomal proteins of other body fluids (saliva and urine)
   122298374
  Exosomal proteins of colorectal cancer cells
   122298374
  Exosomal proteins of bladder cancer cells
   122298374
GTP-binding proteins [BR:cill04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    122298374
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA ATP_bind_1 AAA_16 RsgA_GTPase cobW Septin nSTAND3 AAA_22 AAA_7 AAA_24 PduV-EutP DAP3 NACHT NB-ARC AAA_5 nSTAND1 ATPase_2 NTPase_1 MCM
Other DBs
NCBI-GeneID: 122298374
NCBI-ProteinID: XP_042964029
LinkDB
Position
16:943277..950485
AA seq 205 aa
MSLRRRTLLKVIVLGDSGVGKTSLMNQYVHKRFTQQYKATIGADFVTKELQIDDRLVTLQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHEEFLKQANPANPRTFPF
ILLGNKIDVDGGNSRVVSEKKAKEWCASKGNIPYFETSAKEDYNVDPAFFSIGKTALANE
RDQDIYFQGIPEVASEAEQSGGCAC
NT seq 618 nt   +upstreamnt  +downstreamnt
atgtcattgcgtaggcgcaccttgctcaaggtcatcgtccttggcgacagcggggttggc
aagacgtcgttgatgaatcaatatgtgcacaagaggttcactcagcagtataaagctaca
attggtgccgactttgtcacgaaagagctacaaattgatgacaggctcgtcactctgcaa
atctgggacacggctgggcaagagcggtttcaaagtcttggagttgcattttatagaggg
gcagattgctgtgttctagtttatgatgttaacgtgatgaaatcgtttgatactcttgac
aactggcacgaggagtttcttaaacaggcaaacccagctaatcccaggacatttccattt
atactactcggaaacaagattgatgttgatggtgggaatagtcgtgtggtttctgagaag
aaagcaaaggagtggtgtgcttcaaaaggcaacatcccttactttgagacatcagcaaaa
gaggattataatgttgatcctgcattcttcagtattggcaagaccgcactagccaatgag
cgtgaccaggacatatatttccagggtatacctgaggttgcttcagaggcggagcaaagt
ggtggttgtgcgtgctga

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