Carya illinoinensis (pecan): 122298425
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Entry
122298425 CDS
T08745
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 25-like isoform X1
KO
K15168
mediator of RNA polymerase II transcription subunit 25
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cill03021
]
122298425
Transcription machinery [BR:
cill03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
122298425
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med25_VWA
Motif
Other DBs
NCBI-GeneID:
122298425
NCBI-ProteinID:
XP_042964088
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All DBs
Position
16:564045..578362
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AA seq
860 aa
AA seq
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MVDKKLIVVVEGTAAMGPFWQSVVSDYLEKIIRCFCGNELNGQKPPTSHAELSVVTFYTH
GSYCGCLVQRTGWTRDVDIFLQWLSAIPFAGGGFSDAAIAEGLAEALMMFPIPQNGNLNQ
QNVDTQRHCILVAASNPYPLPTPVYKPQLQNLEKNENIEEQTESRTSDAETVAKSFAQCS
VSLSVVCPKQLPKLKAIYNAGKRNQRIGDPPVDNVKNPQFLVLISENFMEARAALSRSGI
TSIPSNQSPVNVDMAPITSVAGPPPTSIPLGNGPIMNRQAITAGNNPPATVKVEPSTVTS
ILSGPGFSHIPSVARAASQGVPSLQTSSPSSTSQEMITNNDNVQDLKPIVSGVTQPLRPV
GPAPANVNILNNLSQARQVMNSAALSGGSSIGLQSMGQTPISMHMSNMISSGMATSVPAA
QNVLSSGQSGMPSISGSGPLTGNGQVAQNPGLGSFNSATSNASGNSNLGISQPMGNLQGG
VSMGQLGPGMNQGNLSGVQMSQSGISTNQNMMSGLGPSVVSSGTGTMIPTPGMPQQVQSG
MQSLGVNNNSATNMPLSQQTSSALQSAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRSAS
ASETLAANWPATMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLSQLQEKKLCAVIQ
LPSQTLLLSVSDKAYRLIGMLFPGDMVVFKPQISSQQQQQQHQQMQPQQHTQLQQQQLQQ
LQQQQLPQLQQQQQLTQMQQQQIPQLQQQQQLPQMQQQQQLPQMQQQQIPQLQQQQPLSQ
LQPQQQLPQMQQQQPISQLQTQQQLPQLQQLQQQLPQQQQMVGTGMGQAYVQGPGRSQLV
SQGQVSSQGPPNMSGGGFMN
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggtcgataagaagctgatcgtcgtggttgaaggcaccgccgccatgggccccttctgg
caatccgttgtttctgattaccttgaaaagatcatcaggtgtttttgtggaaacgagttg
aatgggcagaagccccctacttctcatgccgagctttccgtggtcactttttatacccat
ggatcttactgtggttgcctagtacaacggacaggctggacaagagatgttgatattttc
ttacagtggctttcagctataccctttgctggtggtggtttcagtgatgctgcaattgca
gaagggctggctgaagctctaatgatgttccctattccgcaaaatggaaacctaaatcaa
caaaatgtggatactcaaaggcattgcattcttgttgctgctagtaacccttatcccttg
cccacaccagtttataagccccagctgcaaaatttggagaagaatgaaaatatagaagaa
caaacagaaagccgcacatctgatgccgagacagttgctaaatcatttgcgcaatgctct
gtctctctgtcagtcgtttgtccaaagcaacttcctaaattgaaagcaatatacaatgcg
ggaaagcggaatcaacgaataggagatccaccagtagacaatgtcaaaaaccctcagttt
cttgttctgatctcagagaattttatggaggcccgtgctgctttaagtcgctctggaatt
acaagtattccttcaaatcagagtcctgtcaatgtggacatggctcctattacttcagtc
gcaggaccgcctcctacttctatcccattagggaatggacctatcatgaacaggcaagca
ataaccgctggaaataacccccctgctactgtgaaagttgagcctagcactgttacttcc
atactatctggacctggcttttctcatattccatctgttgcacgtgctgcttctcaagga
gtcccaagcttgcaaacttcttctccatcttctacttctcaagaaatgatcacaaacaat
gacaatgtgcaagatttgaaacctatagtgagtggtgtgacacaacccttacgacccgtt
ggccctgctccggcaaatgtgaacattctgaataatctctctcaagcacgacaagtaatg
aactctgcagccctaagtggcggaagctctataggacttcaatcaatgggtcaaactcct
atatccatgcatatgtcaaacatgatatctagtggaatggcaacttctgtgcctgctgct
caaaatgtactttcatctggacaatctggtatgccttcgataagtggttctgggcctctg
accggtaatggacaggttgcacaaaatcctggtcttggttccttcaattcagcaacttcg
aatgcgtctggaaattcaaaccttgggatttctcagccaatgggtaatcttcaaggaggt
gttagtatgggtcaattaggacctggcatgaaccaagggaatctttcaggagtacagatg
tcacaaagtggaattagcacgaaccaaaacatgatgagcggccttgggccatcagttgtt
tcttctggaactggaaccatgattcctactccagggatgcctcaacaagtacaatcaggg
atgcaatcacttggcgtcaacaacaattcagcaactaatatgccattgtcacagcaaacg
tcaagtgccttgcaatcagcacaatccaaatatgtaaaagtctgggagggaaacttatct
gggcagagacaagggcagccagttttcatcaccagactggaaggttacaggagtgcttca
gcttctgagacgcttgcagcaaactggccagccacaatgcaaatagttcgacttatatct
caggaccacatgaataataagcaatatgttggaaaggcagattttctggttttccgtgct
atgaatcagcatgggtttcttagccagctgcaagaaaagaagctatgtgcagtcattcaa
ctaccatctcagacattgctgctatccgtttctgacaaggcctaccgcttgattggaatg
cttttccctggggatatggttgttttcaagccacaaatatctagtcagcagcaacaacag
caacatcagcagatgcaaccgcaacagcatacccagctgcaacaacagcaacttcaacaa
ctgcagcaacagcaacttccacaactgcaacagcagcagcaacttacacaaatgcaacaa
cagcagattccgcaactgcaacagcagcagcagcttccccaaatgcaacagcagcagcag
cttccccaaatgcaacagcagcagattccacaactgcaacagcaacaaccactctcgcag
ctgcaaccacaacagcaacttccacaaatgcaacaacagcaaccgatctcacagctgcaa
acgcagcagcagcttccacaactgcagcaattgcagcaacagcttccacagcagcaacaa
atggttgggacaggaatgggtcaagcttacgttcaaggtccaggcaggtcgcaattagtt
tcacagggacaagtttcatcacaagggccacctaacatgtctggtgggggttttatgaat
taa
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