Carya illinoinensis (pecan): 122298432
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Entry
122298432 CDS
T08745
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase component HRD3A-like
KO
K14026
SEL1 protein
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122298432
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Gene cluster
GFIT
Motif
Pfam:
Sel1
TPR_16
TPR_27
ARM_TT21_N
TPR_12
TPR_CcmH_CycH
TPR_7
TPR_3
Motif
Other DBs
NCBI-GeneID:
122298432
NCBI-ProteinID:
XP_042964098
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Position
16:complement(25372354..25378267)
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AA seq
669 aa
AA seq
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MTRCAILKLLVPLILLSLFLLSFTVQPYTIVLTGKEFKQSSTDDFPGWDEFGDSDSPHKS
EDDLDPGSWQPLFEPASPSHASGSSNTSTALEALYFSGVSKMVSVASSGDTRLMEEAAAE
IENSASGGHAHARSVLGFLHGMGLMKQRNKAKSVMYHHFAAEGGNMQSQMALAYSYARQE
MYEKAVELYAKLADVAVKSFLVSKYPPVIEAVRIHIGAEENKEVLMRSRGEDAEEVQILE
FQAQKGNAEAMYAIGMLYYLGLRGLRPDHAKAVSWFLKAVEKGEPRSMEVLGEIYARGVG
VERNYTEALKWLTHASRQQIHSAYNGIGYLYVKGYGVGNKNYTKARECFKKAASKNDSSA
HYNLGVMYLKGIGVKKNFSTAFKYFMQAADADQPKAFYLLAKMLHAGVGLKKNLQEATRL
YKVVAELGPWTSLSRWALESYLKGDVGKAFLLYARMAELGYEVAQSNAAWILEKYGKRSM
CMGESKFCTDAERHRLANYLWWQAFEQGNEHAAMSIGDAYYYGQGIEGDYHRAATAYMLA
KEKSNAQAMFNLGYMYERGQGLPIDLHLAKRYYDQALQTDPNAKLPVTIALASLWIRMNY
ANSFLVHLIDSLPGVYPKIKAWVENVLLEKENATILTLFACLLAVLYLRERNRRHAVAAT
AQLAVRQSE
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgttgcgcaatcctgaagctcttagtccctctcatccttctctctctctttctt
ctctctttcaccgtccaaccatacaccatcgttctcactgggaaagaattcaagcagtcc
tctaccgacgacttccccggctgggacgagttcggcgactccgactcaccccacaagtcc
gaggacgaccttgaccccggctcctggcaaccactctttgagccggcctccccctctcat
gcctctggctcatccaatacgagtacggctctagaagcgctgtacttctccggtgtctcc
aagatggtctccgtagcgagctccggagacactcggttaatggaagaggcggcagcggag
attgaaaactcggcgagtgggggccacgctcacgcaaggtccgtgcttgggttcctgcac
gggatgggattgatgaagcagaggaacaaggccaagtctgttatgtaccatcactttgct
gccgaggggggcaatatgcagtcccagatggccctcgcctattcctacgcgcgtcaagag
atgtatgagaaagcagttgaactttacgccaagttagcagacgtagctgtaaaaagtttc
ttggtttcaaaatatccacctgtgattgaagcagtcagaatccacattggggctgaggag
aataaggaggtcctgatgaggtccagaggagaggatgctgaggaagtccagattctggaa
tttcaggcacagaaggggaacgctgaagccatgtacgcaattggcatgctttactacttg
gggcttagaggattgaggcctgatcatgccaaggcagtgtcgtggtttttgaaggctgtg
gagaagggggagccaaggtcaatggaagttcttggagagatatatgctcggggagttggg
gttgagaggaactacacggaagcgcttaaatggcttacccatgcttccagacagcaaatt
cattcggcttataatgggatagggtatttgtatgtcaaaggctatggtgttggcaacaag
aattataccaaggcaagagagtgctttaagaaggctgctagtaagaatgattccagcgcc
cactataacctaggagtaatgtatctaaaagggattggggtaaagaagaatttttcgact
gcatttaagtattttatgcaggctgctgatgcagatcaaccgaaggcattctacctgctg
gcaaagatgttacatgctggtgtggggctaaagaagaaccttcaagaggcaactagatta
tacaaagtagttgctgaacttggaccatggacttccttgtctagatgggcactcgagtcg
tacttaaaaggtgatgtgggtaaggcattcctcttgtatgcaaggatggctgagctgggg
tatgaggtggcacaaagtaatgctgcatggatacttgaaaaatatgggaaacgtagcatg
tgcatgggagagtctaagttctgcacagatgcagaaaggcatcgacttgcaaattatttg
tggtggcaagctttcgagcagggtaatgaacatgctgcgatgtcgattggggatgcatat
tattatggtcagggtattgagggagattatcatcgtgcagcaacagcttacatgcttgcc
aaagaaaaatctaatgcacaagccatgttcaaccttgggtatatgtatgagcgtggccaa
ggacttccaattgatctccatcttgccaagcgttactatgatcaagcactacagactgat
cccaacgcaaagttgcccgtaacaattgcccttgcaagcttgtggattcgaatgaactat
gcaaatagtttcttggtccatttgattgattcgttgcctggagtctatcctaaaataaaa
gcatgggtggagaatgtgctcttggagaaagaaaatgcgaccattctgactctctttgct
tgtttacttgctgtcctttatcttcgtgagaggaatcgtcggcatgctgttgctgccact
gctcagttggctgtgcgacaatccgaatga
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