Carya illinoinensis (pecan): 122298966
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Entry
122298966 CDS
T08745
Name
(RefSeq) U3 snoRNP-associated protein-like EMB2271
KO
K14793
ribosomal RNA-processing protein 9
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cill03009
]
122298966
Ribosome biogenesis [BR:
cill03009
]
Eukaryotic type
90S particles
Other 90S particles
122298966
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML
WDR55
Beta-prop_EML_2
EIF3I
Beta-prop_SPT8
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF12
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_DCAF4
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
122298966
NCBI-ProteinID:
XP_042964744
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Position
2:6119947..6121712
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AA seq
527 aa
AA seq
DB search
MCIKTSDLSPYAPTSPEDLPCQPEFEKIMKKKSVSAASRGAARMGKRFSRDPFFITESSK
KRRKISKESDVIESDFSDEDYRFLSSKGQDHDRDEEESVGEKRKRLAMAHLDKVRGIAVK
EEEEDDDEEGEKEGQYWDLRVSRILQQEQLERTGRFRRALASRIQKIDTTDDEFRVLVKH
RQSVTAVSLCEDDSKGFSASKDGTILHWDLDSGKREKYQWPTHETLRAHGAKEPSGPAAR
HSRHVLALDVSSDGRYLASGGLDRHIHLWDTRTRAHIQAFSAHKGPVSCLSFRQGTSELF
SGSFDLKVMKWDVEMREKIEPDLCGQRGKIIHMDCQWKERVLTVGRDRKMLLFKVDENEF
SQFKGPSKSYLECCCFISDDEYLSGSDDGSIERWSILRDKPIYIYKNAHTSWTANKNLEQ
KDNERTISSCHFQLANSWVNSLAVCRSSDLAASGAGNGSVRLWAIESETRGIQPLFDLPL
VGFVNSLAFARSGKFLVAGVGQEPRLGRWGRIQSAQNGIAVHSLQLS
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgtgtataaagacctcggatctaagcccctacgccccaacaagtcccgaagaccttccg
tgccagccagagtttgagaagatcatgaagaagaagagtgtgtcagcggcttcaagagga
gcagcgagaatgggcaagagattttctcgggacccctttttcatcactgagtcgtcgaag
aaacggcggaagattagcaaggagagtgacgtgatagagagcgacttctcggacgaagac
tatcggtttcttagttctaaagggcaagatcatgatagggatgaggaggaaagtgtgggc
gagaagaggaagcgcttggctatggcgcacttggacaaggttcggggaattgcagtgaaa
gaagaggaggaggacgatgatgaggaaggtgagaaggaagggcagtactgggacttgcgc
gtgtcgaggattttgcagcaggagcagctcgagcggacaggccgttttcgccgagccctt
gcgtctaggattcaaaagattgatactactgatgatgaattccgagtcctggtgaagcac
cggcaatccgtcactgccgtatctctttgcgaggatgactccaaaggtttttcagcttcc
aaggatggcaccattttgcattgggacttggacagtgggaaacgggaaaaataccagtgg
cctacgcacgagacactaagggcacacggggccaaagagccaagtggtccggctgcaagg
cacagtagacatgttttagcactggatgttagctccgacggtcgatatttggcgagtgga
ggcttagatcgccatattcatctgtgggatacccgtacacgagcgcatattcaggctttt
tcagcacacaaaggacctgtatcgtgtttatcttttaggcaaggaacttcagaacttttc
tctggttcattcgatcttaaagttatgaaatgggatgttgaaatgagagagaaaatagaa
cccgatttatgtgggcagagagggaaaataatacatatggattgccagtggaaagaacgg
gtattgactgttggacgagatcgaaaaatgctgttgtttaaggtcgatgagaatgagttc
tcgcaattcaaaggcccctcaaaatcttatctggaatgttgttgtttcattagtgacgat
gagtacttgtctggctctgacgatggaagtatcgagcgctggagcatattgcgagacaag
cccatatacatttataagaatgctcatacttcctggactgcaaacaagaatcttgaacaa
aaggataatgaaaggaccatctccagttgtcattttcaattggcaaattcctgggtcaat
tccttagctgtgtgcagaagcagcgaccttgctgcatcgggagctgggaatggttctgtt
cgattatgggctattgaaagtgagaccagaggcattcagccattgtttgaccttccgttg
gttgggtttgtgaattctctggcctttgctagatctggaaagttcctagttgctggagtt
gggcaggagcctcgtttgggaaggtggggacgtatccagtcggctcaaaatggaattgca
gttcattcccttcagctctcataa
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