Carya illinoinensis (pecan): 122299044
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Entry
122299044 CDS
T08745
Name
(RefSeq) actin-related protein 4-like isoform X1
KO
K11340
actin-like protein 6A
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122299044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cill03021
]
122299044
03036 Chromosome and associated proteins [BR:
cill03036
]
122299044
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cill04147
]
122299044
Transcription machinery [BR:
cill03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
122299044
Chromosome and associated proteins [BR:
cill03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
122299044
Chromatin remodeling factors
BAF complex
122299044
PBAF complex
122299044
GBAF(ncBAF) complex
122299044
SRCAP complex
122299044
INO80 complex
122299044
Exosome [BR:
cill04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
122299044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
MreB_Mbl
Ppx-GppA
Motif
Other DBs
NCBI-GeneID:
122299044
NCBI-ProteinID:
XP_042964817
LinkDB
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Position
16:complement(23468239..23490953)
Genome browser
AA seq
462 aa
AA seq
DB search
MYGGDEVSAIVIDLGSHTCKAGYAGEDAPKAVFPSVVGAIDQMEVDDLEKTENKSGSVDS
KNTVRTVDSEKTKGKRKLYVGSQALGFRRDNMEVLSPIKDGVVVDWDIVDSIWDHAFREC
LLIDPKEHPVLLAEPSSNTQQQRERTAELMFEKYKVPALFLAKNAVCPLWICDLPSTCST
LIMVLTSFASGRATSLVVDSGGGSTTVAPVHDGYVLQKAVVSSPIGGEFLSDCLMKSLGS
KGITIKPRYSFKRKEIRPGEFQIVDLDIPNTTESYSFYSQRVIASDIKECVCRAPDTPYD
ESAYSNIPMTPYELPDGQTIEIGSDRFKIPDVLFNPSLVQTIPGMENYAETAHSVRGLPQ
MVIESINKCDVDIRRELFSSILLAGGTTSMQQLKERLEKDLLEESPQAARVKVLASGNAT
ERRFSVWIGGSILASLGSFQQMWFSKSEYEEHGASYIQRKCP
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtatggaggcgatgaggtatcggctatagtaatcgacctaggttcgcacacctgcaaa
gccggttacgccggcgaagatgcgcccaaagctgtgtttccttcggttgtcggagcaatt
gatcaaatggaagttgatgaccttgaaaaaactgaaaataaatctggatctgtagattct
aaaaacactgtcaggactgttgattctgaaaaaaccaagggaaaacgcaaattgtatgtc
ggatctcaagccttaggttttcgccgggataatatggaggtgttgtcacccataaaggat
ggagttgttgttgactgggatatagttgacagcatatgggaccatgcttttagggaatgc
ctgttgatagatcctaaagagcatccagtgctacttgcagaaccatcttctaacacccaa
caacaaagagaaaggacggcagagcttatgtttgaaaagtacaaggttcccgcattgttt
ttggccaagaatgctgtatgccccttatggatttgtgacctcccttcaacttgtagcact
ttaattatggttctcacatcttttgcatcaggacgtgctacctcattagttgttgacagt
ggtggaggatcaactacggttgccccagtgcatgatggttatgttcttcagaaggctgtt
gtatcttctccaattgggggagaatttcttagtgattgcttgatgaaaagtttgggaagc
aaaggtatcacgataaaacccagatattctttcaagagaaaggaaatacggccaggagag
tttcagatagtagaccttgatattccaaatacaacagaaagctacagtttctactcccag
agggtaattgctagtgatattaaggaatgtgtttgccgtgccccagatactccgtatgat
gaaagtgcttattcgaacatcccaatgacgccatatgagcttcctgacggccagacaatt
gaaattggatctgacagattcaagattcctgatgttctatttaatccatcactggtccag
acaattcctggtatggagaattatgccgagactgctcattctgttcgaggtttgccacaa
atggtcatagagagcataaataagtgtgatgtcgacattcggagagagctatttagtagt
atactgcttgctggtggcacgacgtcaatgcaacagttgaaggaacgacttgagaaagac
ttgctagaagagtctcctcaagctgctagagttaaagtgttggcgagtggaaatgcaaca
gaaaggagattcagtgtttggattggagggagtatattagcttctctcggttcattccag
cagatgtggttctccaagtctgagtatgaagagcatggggcatcttatattcaaagaaaa
tgcccttaa
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