Carya illinoinensis (pecan): 122299061
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Entry
122299061 CDS
T08745
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 23-like isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cill01002
]
122299061
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cill04121
]
122299061
Enzymes [BR:
cill01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122299061
Peptidases and inhibitors [BR:
cill01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122299061
Ubiquitin system [BR:
cill04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122299061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Choline_bind_1
Motif
Other DBs
NCBI-GeneID:
122299061
NCBI-ProteinID:
XP_042964845
LinkDB
All DBs
Position
16:complement(29616665..29625570)
Genome browser
AA seq
947 aa
AA seq
DB search
MAFKSSSEIVMPDSLGTSIGSEIQSDPPCALANGSPALFHRRIEFHPARKPFKGFGNGGG
GGDFKLETLNPGGGSDQRRSGSNTGQSGLAGKKGDGSEFLEHGLDPELSFGITVRRIGAG
LQNLGNTCFLNSVLQCLTYTEPLAAYLQSSKHQNSCHIAGFCVLCAIQKHVSCALQSTGR
VLAPSDFVRNLQCISRNFRKARQEDAHEYMVNLLESMHKCCLPSGVPGESPSAYEKSLVH
KIFGGRLRSQVKCLQCSYCSNTFDPFLDLSLEIVKADSLHKALANFTAAEQLDGGERQYQ
CQRCKQKVRALKQLTVHKAPYVLTVHLKRFHAHDPGQKIKKKVHFSCTLDLKPFVSGSYD
GDLRYTLYGVLVHDGWNTHYGHYSCYVRTSNGIWYYLNDNQVAPASEKRVLEQQAYMLFY
VRDRRNIIPRKIPTDVAHKENLKGNTNGIRTSSSFNQGLKEIVKNGPVENRLSGATSATS
VPRNDVLNVGPHRTPLTKEELVQKNNCLIITGCSVLEKGSVPEPVLKLPLSNTPQETLPV
TDPNSRECLSVSSPSGDGGAPDIEKTAKGIKNDHKEHGDSRKDMRVSVAASPTFSDPQSS
STAKLVREETSQKINHVLHVAPSQNLNDKKLTTMDPVGNTSHEGTVGNSLVENAGVLVQK
IVLDGSVKLCSSIKRNRSQKQARNCKHHRKLKKKLVKCQAASMQLNSHFLFQASLSLWKK
KKHKRNKKHTSDVKNINRENLFDMDCISTDLGPSTSEITRKITSRLAQPLRKGTKSGSKE
GASNAAAKDLMKMEDIINGEFRQRIDQSGTVLATDKQLEKSSGSSSVADQWEAGRVDGPK
EGKRKVTQNGLMSMLTRGLEETVVAQWDGIELPTSQSVASNGMGKISIGYIPDEWDEEYD
RGKRKKVRQFKHTFGGPNPFQEIATKKTQTNKTKVDRSSSGNQPFRI
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atggcttttaaatccagttcagagattgtaatgcctgacagcttaggaactagtatagga
tccgaaatccaatcggatcctccatgtgctttggcgaatggatccccggctttgtttcac
aggagaatagagtttcacccggcgaggaagccctttaagggattcggtaatggcggcggt
ggtggcgatttcaagcttgagactctgaaccccggcggcggctcggaccaacggcgatca
ggttctaacacgggtcaatcaggtttggctgggaagaaaggagatgggtccgagtttttg
gagcatgggttggatcctgagctcagcttcgggattactgttcggagaattggtgctggc
ctgcaaaatcttggaaatacttgtttcctcaattcagtgttgcagtgtctaacatacaca
gagcctttagcagcatacctgcagagtagcaagcatcaaaattcttgtcatattgctgga
ttttgtgttttatgcgccatccaaaagcatgtcagctgcgctctacaatcaactgggaga
gtattagcacctagcgattttgtcaggaacttgcaatgcatatcacggaatttccggaaa
gctagacaagaggatgcgcatgagtacatggtaaatttgctggaatcaatgcataaatgt
tgcttaccttctggagtgcctggtgaatcccctagtgcttatgagaaaagtttggtgcac
aagatattcggaggtcgccttaggagtcaggttaaatgcttgcaatgttcttattgctcc
aatacgtttgatccattcttagatttaagtcttgaaatagtcaaggcagattccttgcat
aaagcacttgcaaacttcactgctgctgagcagttagatggaggagaaaggcaatatcag
tgtcaacgatgcaagcagaaagttagggctctcaaacagcttacggtccacaaggcacca
tatgtcctaaccgttcacttgaagcggtttcatgctcatgatcctgggcaaaagattaaa
aagaaagttcattttagctgtacattagatttgaaaccctttgtcagtggttcctatgat
ggagatctgagatatactctttatggtgttttagtccatgatggttggaacacccattat
ggacattattcttgctatgttcgcacttcaaatggcatttggtactatctcaacgacaat
caggttgccccagccagtgagaagagagttctagaacagcaagcttacatgctgttttat
gttcgtgacagaagaaatattattccaaggaaaatccccactgatgttgctcataaagag
aatttgaaaggaaacactaatggaattagaacatcttccagtttcaaccaaggcttaaag
gagatagttaagaatggtccagttgagaatcggttaagtggtgcaacctctgctacttct
gttcctcggaatgatgtgttaaatgttggtccacataggacaccccttaccaaggaagaa
ttggtacaaaaaaataattgtctgataattaccggatgctcagtgctggaaaagggttct
gtaccagaacctgtcttaaagttgccattatcaaacactccacaggaaacacttcctgtt
actgacccaaattcaagagaatgcttgtcagtatcatctccatctggtgatggtggggct
cctgatattgaaaagacagctaaaggcattaaaaatgatcataaagagcatggagattca
aggaaagatatgagagtctcagttgcagcatcacctaccttcagtgatccccaaagctct
tctactgctaaacttgtcagagaggagacctctcagaagattaatcacgttttacatgta
gcaccatcacaaaatcttaacgataagaaattgactacaatggaccctgttgggaataca
tcccatgaaggcaccgttggcaattcactggttgagaatgctggtgttctggttcaaaaa
atagtgcttgatgggtcagtgaaattgtgctcatcaatcaagagaaatagatcacagaaa
caagctcgtaattgcaaacatcacagaaaactgaaaaagaagctagtgaaatgtcaggca
gcgagcatgcagcttaattcacacttccttttccaggcatcgttgagtttgtggaagaag
aaaaagcacaaaagaaacaaaaaacacacttcagatgtgaagaatattaacagagaaaac
ttgtttgacatggattgtatctcaactgatctggggccatctacttctgagattaccagg
aaaattacctcacgtttagctcaacctctgagaaaagggactaagtctggttcaaaagag
ggagctagtaatgctgctgccaaggatttaatgaagatggaagatataataaatggtgaa
tttagacaaagaatcgatcagagtggaactgtgcttgccactgataagcaattggagaag
agctctggctctagctcggtagcagatcagtgggaagcaggacgagtagatggtccgaaa
gaaggaaaaagaaaagtaacgcagaatggtttgatgagtatgctcacccgaggtctggag
gagacagttgttgctcagtgggatgggatagagttgcctacatctcaatctgtcgcatca
aatggcatgggtaaaatcagcattggctacataccagatgaatgggatgaagaatatgac
aggggaaagagaaagaaggttaggcagtttaagcatacttttggtggaccaaatcctttt
caagaaatcgccaccaagaaaacacaaacgaacaagactaaagtggaccgatctagctca
ggaaatcagccattcaggatatga
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