Carya illinoinensis (pecan): 122299070
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Entry
122299070 CDS
T08745
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
122299070
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cill04040
]
122299070
Ion channels [BR:
cill04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
122299070
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Motif
Pfam:
Ion_trans
cNMP_binding
DUF6525
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
122299070
NCBI-ProteinID:
XP_042964915
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Position
16:27264523..27304434
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AA seq
770 aa
AA seq
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MSGFEKDDIPMLSDTNGQFLDQHADSQFQRFAYRTRSASISIPMDSMESYASETNLVGHT
GPLRSERRTPFIQMSGPLYVSRKPESLFLPNQGVTGPKTMEPLASKFTSFKGKDQDDWPH
DNNFGKNEHLLRSGQLGMCDDPYCTTCPTYNNFIAAQQMNSKASLAFDPKFHNVLYGDAK
GWAKGFFSSLQQYIPGIMNPHAKVVQQWNKFFVISCLVAIFVDPLFFFLLSTIEDNRCIV
INWPLTKTIVAFRSLTDLIYFFRMLLQFRLAYVAPESRVVGAGELVDHPKKIALNYIRGF
FFIDLFVVLPLPQVTIIVLFVLQKSLRSGANSAKNHLQTAVLVQYIPRLYRFLPLLAGQS
SSSLVFESAWANFVINLLTFVLSGHFVGSCWYLFGLQRVNQCLREACHHSGIDSCTSFID
CGHGSDIENFHSGQSRNTWKNNKNASACFMKDGFSYGIYEQAVNLTTKHSIITRYTYSLF
WGFQQISTLAGNQTPSYFVWEVLFTMAIIGLGLLLFALLIGNMQNFLQALGRRRLEMSLR
RRDVEQWMRHRRLPEELRRQVRQAERYNWAATRGVNEEMLLENLPEDLQRDIRRHLFKFV
KKVRIFAMMDDPVLDAICERLRQKTYIKGSKILHQGGLVEKMVFLVRGKTESKGDDGMVA
PLSEGDVCGEELLTWCLEQSSVNKDGKKIKIPGQRLLCNRTVTCLTNVEAFSLRAADLEE
VTSLFTRFLRSQHVQGAIRYESPYWRSLAAARIQVAWRYRKKRIDRAETL
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgtctggttttgaaaaagacgacatacctatgctttcagacacaaatgggcagtttttg
gaccaacatgcagattctcaattccagagatttgcatacaggacaaggagtgcatcaatt
tccattcctatggactcaatggagtcctatgcaagtgaaactaatcttgtgggccatact
ggtcctttacggagtgaaagaaggactccattcatacagatgagtggtccactatatgtt
agccgcaaacctgaaagcctttttttgccaaatcaaggtgtaacaggacccaaaacaatg
gaacctttagcaagcaagtttacttcgtttaaaggcaaggatcaagatgactggccacac
gacaacaattttgggaaaaatgaacatttgctgaggtctgggcagttgggaatgtgcgat
gatccttattgcacaacttgcccaacatataacaacttcatagcagctcaacaaatgaac
tctaaagcttcattagcttttgatcctaagtttcataatgttctctatggggatgccaaa
ggctgggccaagggttttttttcttctctccaacaatatattcctggcatcatgaaccct
catgctaaagttgtgcaacaatggaacaaattttttgtcatttcttgcttggtggcaatt
tttgtggacccattatttttcttcttgctatccacgatagaggataacaggtgtatagta
attaactggcccctgaccaaaacaattgtggctttcagaagtttgactgatctcatatat
ttcttccgcatgcttcttcagtttaggttggcttatgtggcccccgagtcgagagtggtt
ggtgctggagagttagttgatcatccaaaaaaaattgctctcaactatattcgtggattt
tttttcattgacttgtttgttgttttaccgcttccgcaagtaacgatcatagtattgttt
gttctacaaaaatctttgagatcaggagccaatagtgctaaaaatcatttacagacagct
gttcttgttcagtacattcctaggctgtataggtttctgcctctacttgctggtcagtct
tcaagcagcttggtatttgagtcagcatgggcaaattttgtcataaatcttctcactttc
gtgttgtccggccattttgttgggtcatgctggtacctctttgggttacagagggttaat
caatgtcttcgagaagcctgccatcactctggaattgattcatgcacaagctttattgac
tgtggccatggcagcgatattgaaaattttcactctggtcaatcacggaatacctggaaa
aacaacaagaatgcaagtgcttgttttatgaaagatggtttttcttatggaatctatgag
caagctgtcaatcttaccactaaacatagcattataaccagatatacatattcattattt
tggggatttcagcaaatcagtacactggctggaaatcaaactccgagttattttgtttgg
gaagtcctttttacgatggccatcattgggctcggccttttgctctttgctctactcatt
ggaaatatgcaaaactttcttcaggctcttggacgaaggaggttggaaatgtctctcaga
cgtcgtgatgttgagcaatggatgagacaccgacgcttgccagaggaactaaggcggcaa
gtaagacaagctgaaaggtataattgggctgctaccagaggggtaaatgaagaaatgctc
ttggagaatctgcctgaagaccttcagagagacataagacgccatctcttcaagtttgtg
aagaaagttcgaatctttgccatgatggatgatcctgtcctggatgccatttgtgagcga
ctaagacaaaagacatacattaaaggcagcaaaattttgcatcaaggtggtctggttgag
aagatggttttccttgtacgtggcaaaacagagagcaaaggagatgatgggatggtagct
cccttatctgaaggagatgtttgtggtgaggaacttctcacatggtgtcttgagcaatct
tcagtaaataaagatgggaaaaaaataaagattcctggacagagattgctttgcaacagg
acggtaacatgcttaacaaatgtagaagcattttcactaagagctgcagaccttgaggaa
gtcaccagtcttttcacaagattcttgcgcagtcaacatgttcaaggagctataaggtat
gaatcaccctactggagatccctagctgcagcccgcattcaagtagcatggagatacagg
aagaaacgtatagatcgtgccgaaacgttgtga
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