Carya illinoinensis (pecan): 122299224
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Entry
122299224 CDS
T08745
Name
(RefSeq) protein argonaute 1-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122299224
03036 Chromosome and associated proteins [BR:
cill03036
]
122299224
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
122299224
Chromosome and associated proteins [BR:
cill03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
122299224
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
122299224
microRNA pathway
RISC loading complex
122299224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
Gly-rich_Ago1
ArgoMid
Motif
Other DBs
NCBI-GeneID:
122299224
NCBI-ProteinID:
XP_042965246
LinkDB
All DBs
Position
16:27365624..27375233
Genome browser
AA seq
1079 aa
AA seq
DB search
MGKKKKTGLPSGGESSQSQQESSGSGSGGGGGGSSGRGYQPRPAERSAPPQQQHGGGNQG
GRGWGPQGGRGGYGGGRSGRGMPPQQQYGGQPEYHGQGRGGPPQQGGRGWFGGGGRGGMS
RGLGVGPSPPRPSDPELPELHQAIQVPHQPGVRPPGRMSSEASSSTRPIESSQVARQFEK
LAIEGDSSQPIQPVPPSSKSMRFPLRPGKGSAGTKCIVKANHFFAELPDKDLHQYDVTIT
PEVTPRVVNRAVMGQLVRLYRETHLGKRLPAYDGRKSLYTAGPLPFQSKEFRIALMDEDD
GSGGVRREREFKVVIKFAARADLHHLGLFLQGRQADAPQEALQVLDIVLRELPTSRPRYC
PVARSFYSPDLGRRESLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIEFVT
QLLNRDVTSRPLSDSDRVKIKKALRGVKVEVTHRGNMRRKYRISGLTSQATRELTFPVDE
RGTVKSVVEYFYETYGFVIQQSQWPCLQVGNQQRPNYLPMEVCKIVEGQRYTKRLNDKQI
TALLRVTCQRPQQREYDIMKTVRHNAYDDDPYAKEFGIKISERLATVEARTLPAPWLKYH
DTGREKHCLPQVGQWNMMNKKMVNGGVVNNWICINFSRVVQDGVAHGFCHELAQMCCISG
MAFKLEPVLPPVTGRPDHVDKVLKTRFHDAMTKLQPQRKELDLVIVILPDNNGNLYGDLK
RICETDLGLVSQCCLTKHVFKTNKQQYLANVALKINVKVGGRNTVLVDALSRRIPLVSDQ
PTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEITKYAGLVCAQAHRQELIQDLFKTWQD
PVRGTVSGGMIKELLISFHSATGQKPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASLE
PNYQPPVTFVVVQKRHHTRLFANNHHDRNTVDKSGNILPGTVVDSKICHPTEFDFYLCSH
AGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRA
RFYMDAESSESGSITSGAAGGRGGMGGAGPRSTRLPAANAAVRPLPALKENVKRVMFYC
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaagaagaaaaccggacttcctagtgggggtgagagctcacagtctcagcag
gaaagtagtggtagtggtagtggtggtggtggtggtggtagtagtggtcggggttaccaa
ccacgccctgctgagcggagtgctccacctcagcagcaacatggaggaggaaaccaagga
ggtagaggttggggccctcaaggaggtcgtggaggttatggtggggggcgcagcggtcgg
ggaatgccaccgcagcagcagtatggtgggcaacctgaatatcacggccagggaagggga
gggccaccccagcaaggtggtcgtggatggtttggcggtggcggccgtggtggcatgagt
aggggccttggcgtaggaccttccccaccgagaccatcagaccccgagcttcccgaactg
caccaagcaatccaggttccacatcaaccaggggtccgtccgcctgggcgcatgtcatct
gaggcgagttcatctacccgaccaatcgagtcgtctcaagtggcccggcagtttgaaaaa
ctcgccatcgaaggagattccagccaacccattcaacctgtgccaccatctagcaaatca
atgaggttccctcttcggccgggcaagggtagcgctgggacaaagtgtatagttaaggct
aatcacttctttgctgaattaccagacaaagatttgcaccagtatgatgttactattact
cctgaggtgacacctcgtgtagtcaacagagctgtaatgggacagctcgtgagattatac
agagaaacacatcttggaaagaggctccctgcctatgatgggcgaaagagtctatatact
gctgggccgctcccttttcaatcaaaggagtttaggatcgcacttatggatgaagatgat
ggatctggtggcgtaaggagagagagagaattcaaagtcgtgataaaatttgctgcacgt
gcagacctgcaccatttaggactctttttgcagggtaggcaagccgatgcaccgcaggaa
gcacttcaggttcttgatattgtcctgcgtgaattacctacatctagacctaggtactgt
cctgtggctcgttccttctattcccctgatctgggaagaagggagtctttgggtgagggg
ttggagagttggcgtggtttctatcaaagcattcgtccaactcagatgggactgtctctg
aatattgacatgtcttcgactgctttcattgagccattgccggtaattgagtttgtaacc
cagctactgaatcgggatgttacttctaggccgttatctgattctgatcgtgtaaagata
aaaaaggccttacgaggagttaaagtcgaggttacacatcgtggaaacatgcgaaggaag
taccggatatctggtttaacatcacaggcaacacgggagctgacgtttcctgttgatgaa
agaggaacggtgaaatctgtggtcgagtacttttatgaaacatatggctttgtgattcaa
cagtcacaatggccttgtctgcaagttgggaaccaacagagaccaaattatttgccaatg
gaggtttgcaagatagttgagggtcagaggtacaccaagaggctgaatgacaaacaaatt
actgctttactgagggtgacctgccagcgacctcagcaaagggagtatgatataatgaag
acagttcgtcacaatgcgtatgatgatgatccttatgcaaaggagtttggcattaaaatc
agtgagaggctggctacagttgaagctcgtactcttcctgcgccatggttgaaatatcat
gatacaggcagagaaaaacattgcctgccacaagttgggcagtggaatatgatgaataag
aaaatggtcaatgggggagtagtcaacaattggatttgcataaatttttcacgggttgtg
caagacggtgtagcccatgggttttgccatgaacttgctcaaatgtgctgcatttccggc
atggcatttaaacttgagccagtgcttccaccggtgactgggcgtcctgatcacgttgat
aaagtcctgaaaactcggttccatgatgccatgactaagctccagcctcagagaaaggag
cttgaccttgttattgttattttaccagataacaatggaaatctttatggtgatttgaag
cggatctgtgaaacagatcttggactcgtttcccaatgctgcttgacaaagcatgtattt
aaaacaaataagcaacaatatctggcaaatgtggcattgaagataaatgtcaaggtggga
gggaggaatactgtgcttgttgatgcactctcgaggcgtatacctttagtcagcgaccag
cctaccataatttttggtgctgatgttacacatcctcatccaggagaggattcaagccca
tcaattgcagctgttgtggcatctcaagattggccagaaatcacaaaatatgctggtttg
gtttgtgctcaagcccatcgacaagaactgatccaagatctcttcaagacatggcaggat
cctgtaagagggacagtgtctggtggcatgattaaggaactactcatatctttccattca
gcaactgggcagaaaccaaaacgtatcatattttacagggatggggtgagtgaagggcag
ttctatcaagtcttgctgtatgaacttgatgctatccgaaaggcttgtgcctctttggag
ccgaactatcaacctcctgtgacttttgtcgtggttcagaagcgccatcacacaaggttg
tttgccaacaaccatcatgaccgcaatacagttgataagagtggaaacatattgcctggt
actgttgtagattccaaaatttgtcacccaactgaatttgacttctacctttgttctcat
gctggaattcagggcacaagtcgtccagctcattaccatgtactctgggatgagaacaag
tttactgccgatgggctgcagtcccttacaaataatctttgctacacgtatgcaaggtgc
actcgctctgtctccattgtgccccctgcatactatgcccatcttgctgctttccgggca
cggttctatatggacgcagagtcctcagaaagtggctccatcacaagtggtgctgctgga
ggacgtgggggcatgggcggagcaggtccacgaagcactcggttaccagcagcaaatgct
gctgttcgacccctacctgcactcaaggagaatgtcaagagggtcatgttctactgttag
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