KEGG   Carya illinoinensis (pecan): 122299270
Entry
122299270         CDS       T08745                                 
Name
(RefSeq) protein decapping 5-like isoform X1
  KO
K18749  protein LSM14
Organism
cill  Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:cill00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cill03019]
    122299270
Messenger RNA biogenesis [BR:cill03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     122299270
SSDB
Motif
Pfam: LSM14 FDF SM-ATX
Other DBs
NCBI-GeneID: 122299270
NCBI-ProteinID: XP_042965340
LinkDB
Position
16:393177..398524
AA seq 596 aa
MALASESASRPSTTSADSYIGSLISLTSKSEIRYEGVLYNINTQESSIGLENVRSFGTEG
RKKDGPQVPPGDKIYKYILFRGSDIKDLQVKSSPPVQPMPPINIDPAIIQSHYARPISTS
TSLPPAVSGSLTDISSHSAQLGLHGSSFQGGLPLYQPGGNIASWGATPPPSSANGGGLAM
PMYWQGYYGPPNGLPHLHQQSLLRPPPGLPMPSSLQPLMQYPNFNVSLPSGSSNLPEVPS
SLPPASSSSMNLSSSSLAPSTLSSTLPPVPSVTLASETLINSVPSKGPPSSGLPTIALGS
SMPSLAPLAMPSPDINAILPTISNKPSAFPGPILSYQASSQSTSSIVGTSNTIHAEAPAP
SLVTPGQLLQSVPSAVASSQTLQTAHKDVEVDQVSSSSSESIVPVPAEGQPPLLPLPIPS
QTSQKPNGTPFQYRQGYRGRDRGRGSGSSRPVTKFTEDFDFIAMNEKFKKDEVWGHLGKS
NKSHSGEGDGEVSDEDDTLDDEDAQPSKFEVNQSVYNKDDFFDSLSCNALNHDSQRSRFS
EQMKIDTETFGDFTRYRGGRGGRGSGRGGRSRGGYYGRGYNYVGRGRGPGIFGRGP
NT seq 1791 nt   +upstreamnt  +downstreamnt
atggctttggcttccgaaagtgcttccagaccatccactacatcggccgattcctacata
gggagcttgattagtttgacttccaagagcgagatcagatacgagggcgtactctataac
atcaacactcaagagtccagtattggacttgaaaatgtaaggtcatttggaacagaagga
aggaaaaaagatggtccacaagtccctcccggcgacaaaatctataaatatatactattc
cgtgggagtgacatcaaggatttacaggttaaatcttctccacctgttcagcctatgcca
cccataaacattgatcctgctattattcagtctcactatgctcgcccaatttctacttct
acaagcttgcctcctgctgttagtgggtctttgacagatattagttcccatagtgcacag
ttgggactccacgggtcaagtttccaaggtggccttcctttgtatcagcctggaggtaat
atagcatcttggggagctacaccacctccttctagtgcaaatggtggtgggcttgctatg
ccaatgtactggcaaggatactatggcccaccaaatgggcttcctcatttgcatcagcaa
tctttgcttcgtccaccacctgggctgccaatgccttcttcactgcagccgctaatgcaa
tatcctaattttaatgtctctttaccctctggttcatcaaacttacccgaagttccatct
tctttgcctcctgccagttctagttccatgaatttaagctccagttctttagcaccatca
actttgtcgtcaactctgcctcctgtgccatcagttacactagcttctgaaacattaata
aactcggtgcccagcaagggcccccctagttctggccttccaacaattgcactaggttct
agtatgccatcactggctcctttagcgatgcctagcccagatataaatgctattttgcca
acaatctccaacaagcctagtgcatttcccggaccaatcttgtcatatcaagcctcttct
caatctacctcatctattgttggaacatccaacactattcatgcagaagcaccagcgcca
tcattagtaactccaggtcagctgttgcaatctgtacctagtgcagttgcttcttcccaa
actttacaaacagcgcataaggatgtagaagtggatcaagtatcatcttcatcatcagaa
tcaatagtcccagttccagctgaaggtcagccaccactactgcctttgccaataccttca
caaacttctcaaaagccgaatggaactccttttcaatatcgtcaaggttatcggggacgt
gataggggaagaggaagtgggagttcacgtccagtaacaaaattcactgaagattttgat
ttcatagctatgaatgagaaatttaagaaggacgaagtgtggggtcatcttggcaagagt
aataaatctcattcaggggaaggggatggagaagttagtgatgaagatgatactctagat
gatgaagatgctcaaccatcaaagtttgaagtcaatcagtctgtctataataaagatgat
ttctttgattccctctcctgcaacgcactcaatcatgattcacaaaggagtagattctct
gagcaaatgaagatagacacggagacttttggtgacttcacaagatatcggggtggtcga
gggggtcgtgggtctgggcgtggtggccgttctcgtggtggttactatggaagggggtat
aactacgtagggaggggccggggaccaggcatcttcggtcgtggcccttag

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