Carya illinoinensis (pecan): 122299333
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Entry
122299333 CDS
T08745
Name
(RefSeq) ribosome maturation protein SBDS isoform X1
KO
K14574
ribosome maturation protein SDO1
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122299333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cill03009
]
122299333
Ribosome biogenesis [BR:
cill03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
122299333
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Gene cluster
GFIT
Motif
Pfam:
SBDS_N
SBDS_domain_II
SBDS_C
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
122299333
NCBI-ProteinID:
XP_042965484
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Position
16:complement(2411708..2415403)
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AA seq
358 aa
AA seq
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MSRILVQPVGQKRLTNVAVVRLKKRGTRFEIACYKNKVLSWRSGFEKDLDEVLQSQIVYS
NVSKGILSKSKDLIAAFGTDDQGKICLEILDKGDLQVAGKERESQLSSQFRDIATIVMQK
TFNPETQRPYTISMIERLMHEIHFAVDPHGSSKKQALEVIHELQKHFPIKRSPMRLRLYV
PEKNYSSLLEKLNIWNATIVSKDDFGSQPSIVCEIDPGLYRDSSEFVSNLQGRFEVLAHS
VHVEGDTHADDYDDYADGLSVLPKESAKHTSELSEKFQKQTTVSVESGNAKGEGKQNKCS
TCNAFFGDSKEFRDHFKGEWHKHNVKRKTRQLPPLTEEECMVDAEAGDSRADLKDYSF
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggatactggtgcagccggtagggcaaaagagactaacgaatgtcgctgtggtc
cgcctcaagaagcgcggcactcgcttcgagatcgcctgctacaagaacaaggttctctct
tggcgttctggcttcgagaaagatttggatgaagtgttgcagtcacagatagtttattca
aatgtttcaaaaggaattctttccaagtcaaaagatttgattgcggcttttggaactgat
gatcagggaaaaatatgcttggagattttggataaaggagatcttcaagtggctgggaag
gagagagaatctcagttatctagtcagtttcgggatattgcgaccattgttatgcagaag
accttcaatcctgaaactcaacgtccttacaccattagcatgattgagcgacttatgcat
gaaattcattttgctgttgatccacatggtagctcaaagaagcaggctctggaagtaata
catgagcttcagaagcactttccaataaaacggtcgccaatgagattacgactctatgtt
ccagaaaagaattattcctctcttttggagaagctgaatatctggaatgctaccattgtt
tcaaaagatgattttggaagtcagccgtctattgtttgtgaaattgatcctggtttatat
cgggactctagtgaatttgtgagcaatttgcaaggacggtttgaagttcttgcacactct
gtgcatgtggagggagatacccatgcagatgattatgatgattatgccgacgggctgtca
gtcttacccaaggaatctgctaaacatacgtctgaactaagcgagaaattccaaaaacag
accactgtttctgttgaaagtgggaatgccaagggggaggggaagcaaaataagtgcagt
acatgcaatgcattttttggggattccaaggagttcagggatcacttcaagggtgagtgg
cataagcataacgtgaagcgcaagacccggcaactccctccccttactgaagaagagtgc
atggttgacgctgaagctggtgactcgagggcagatttgaaggattattcattttaa
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