Carya illinoinensis (pecan): 122299346
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Entry
122299346 CDS
T08745
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03015
mRNA surveillance pathway
cill04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122299346
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
122299346
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cill01009
]
122299346
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122299346
03036 Chromosome and associated proteins [BR:
cill03036
]
122299346
Protein phosphatases and associated proteins [BR:
cill01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
122299346
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
122299346
Chromosome and associated proteins [BR:
cill03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
122299346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
HEAT_EF3_N
Vac14_Fab1_bd
Htt_N-HEAT_1
HEAT_EZ
PDS5
Adaptin_N
SCD
CLASP_N
TAF6_C
Cnd1
TPR_TNPO3_IPO13_3rd
Motif
Other DBs
NCBI-GeneID:
122299346
NCBI-ProteinID:
XP_042965497
LinkDB
All DBs
Position
16:complement(23801799..23812847)
Genome browser
AA seq
587 aa
AA seq
DB search
MAMIDEPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGDERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVDFANVLLPPLETLCTVEETCVRDKAVESLCRIGAQMKEQ
DLVEYFIPLVKRLAAGEWFTARVSSCGLFHIAYPSAPETLKTELRTIYSQLCQDDMPMVR
RSAATNLGKFAATVEAAYLKTDIMSIFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRSDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILSPELAIQHILPCVKELSTDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLKDKVYSIRDAAANNVKRLAEEFGPEWAMQHIIPQV
LDMINNPHYLYRMTILHAISLLAPVMGPEITCSKLLPVVINASKDRVPNIKFNVAKVLQS
LIPIVDQSVVEKTIRPCLVELSEDPDVDVRFFATQALQSSDQVMMST
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggccatgattgatgagcctctctatccaattgccgtcctaatcgacgagctcaaaaat
gaagatattcagctccgattaaactcgatccgccggctctccacaatcgctcgcgccctt
ggggacgagaggaccaggaaggagctgattccttttctcagcgagaacaacgatgacgat
gatgaagtgcttcttgcaatggccgaggaattgggggtgttcattccctatgttggaggt
gttgattttgcgaatgtgctgcttccaccattagaaactctctgcacagttgaagaaacg
tgtgtgagggacaaagcagtggagtccttgtgtagaattggggcgcaaatgaaagaacag
gacttggttgagtacttcattcccctggttaagagactggctgctggtgagtggtttact
gctcgagtctcctcatgtggcttgttccatattgcttatccaagtgccccagagacatta
aagactgagctacgaacaatttacagtcagctttgtcaagatgacatgcctatggttagg
agatctgctgcaacaaacctgggaaaatttgctgctactgttgaagctgcatatttgaaa
actgacattatgtcgatatttgaggatctgactcaagatgatcaagattctgttcggtta
ctggctgttgaaggttgtgcagcacttggaaaattgttggaacctcaagattgtgtggca
catattctccctgtcatagttaatttctcacaggataaatcttggcgtgtccgttatatg
gtagcaaatcaattatatgaactatgtgaagccgtaggtcctgaacctaccaggtcggac
ctggtacctgcatatgttcggctacttcgtgataatgaggctgaagtacgcatagctgct
gccggaaaagttactaagttctgccggatattgagtccagaactcgcaattcagcatatc
cttccctgtgtgaaggaactgtcaacagactcgtctcagcatgttcgttctgcattggct
tctgttataatgggaatggcaccagttttaggaaaggatgctacaattgagcaactgctt
cctatttttctttcccttttaaaggacgagtttcccgatgtccggctgaatattatcagc
aagcttgatcaagttaaccaggtcatcggaattgatctactgtcacagtctctcttgcca
gcaattgttgagcttgctgaggatagacactggagggttcggcttgcaataatagaatat
atacctttgttggcaagtcaattgggtgtaggtttttttgatgacaagctcggtgctctt
tgcatgcaatggttaaaagataaggtttactcaattcgtgatgcagctgcaaataatgtg
aaacgcctcgcagaagaatttggcccagagtgggcaatgcagcacataattccacaggtc
ttggacatgattaacaacccccactatctgtatcggatgaccattctacatgcaatttct
ctacttgctcctgttatgggcccagaaattacttgttccaaacttctgcccgtggtcatc
aatgcatcaaaagacagggttcctaacatcaagttcaatgtggctaaagtgttgcagtca
cttattcccatagttgatcagtctgtggtggagaaaacaattcgtccatgtctggttgaa
ctgagtgaggatccagatgttgatgtcaggttctttgctacccaagcactacagtcaagt
gatcaagtcatgatgtctacttag
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