KEGG   Carya illinoinensis (pecan): 122299374
Entry
122299374         CDS       T08745                                 
Name
(RefSeq) F-box protein SKP2B-like
  KO
K03875  F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cill00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    122299374
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cill04121]
    122299374
Ubiquitin system [BR:cill04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     122299374
SSDB
Motif
Pfam: DUF7885 LRR_6 LRR_4 LRR_At5g56370 F-box-like F-box LRR_Zer-1 LRR_At1g61320_AtMIF1 LRR_8
Other DBs
NCBI-GeneID: 122299374
NCBI-ProteinID: XP_042965550
LinkDB
Position
16:complement(2463302..2468073)
AA seq 372 aa
MVGKDNLRAEDLNLCFEKLMMLGGNGIQKGGVKMEGGIITEWKDIPTELLLQIVSLVDDK
TVIMASGVCRGWRDAICLGLTHLSFSWCSKNMNNLVLSLAPKFTKLQNLILRQDKPQLED
HAVETIANCCHDLQVLDLSKSFKLSDSSLYSLAHGCPNLSKLNISGCSAFSDSALAYLAS
FCHKLKVLNLCGCVKAASDRALQAIGCYCSQLQSLNLGWCDNVSDVGVMSLAYGCPDLRT
LDLCGCVRITDDSVIALANRCLHLRSLGLYYCQNITDRAMYSLAYSRVKKTSMWEPVNEI
KDEDGLRTLNISQCTALTPPAVQAVCDSFPSLHTCSGRHSLIMSGCLNLMSVHCACAFHA
HRTTSNVAHPAH
NT seq 1119 nt   +upstreamnt  +downstreamnt
atggtaggtaaagacaacttaagggctgaggacttgaacttgtgctttgagaagcttatg
atgcttggtggaaatgggattcaaaaaggaggggtgaaaatggaaggtggtatcatcact
gagtggaaggatattcccacagagctcttgttgcaaattgtttctcttgttgatgataag
acggtgatcatggcatctggagtgtgtcgtgggtggagagatgctatttgcttgggcctt
acccacctctctttctcatggtgcagcaagaacatgaacaacttggtcctatctcttgct
ccaaaattcacaaaattgcagaatctcatattgcgccaagataaaccacagcttgaggat
catgctgttgaaactatagcaaactgctgtcatgatctgcaggtcctggacctcagcaaa
agtttcaagcttagtgacagctctctgtattccctggctcatggttgccctaatctttca
aaactcaatatcagtggatgttcagcattcagtgacagtgctcttgcatatctggctagt
ttttgccataagttaaaggttttaaatctttgtggatgtgtcaaagctgcatctgaccgt
gcattgcaggcaattggatgttactgcagtcagttgcagtctttaaatttaggatggtgt
gataatgtaagtgacgtgggagtaatgagtttagcatatggatgccctgatctcagaact
cttgatttgtgcggctgtgttcgcataacagatgatagtgtgattgctcttgcaaacaga
tgtcttcatttgagatccctcggcctgtactactgtcagaacatcacagacagagcaatg
tactctttggcctacagccgagtgaagaagacttcaatgtgggaaccagtgaatgaaatt
aaagatgaggatgggcttaggactctcaacatcagccagtgcacggcacttaccccgcct
gctgttcaggcagtgtgcgattcatttccttcactccacacttgctcgggaaggcattcg
cttatcatgagcggctgtctgaacttgatgtccgtgcattgtgcctgtgccttccatgca
caccgcacaaccagcaatgttgctcacccagctcattga

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