Carya illinoinensis (pecan): 122299413
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Entry
122299413 CDS
T08745
Name
(RefSeq) probable GMP synthase [glutamine-hydrolyzing]
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122299413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cill03400
]
122299413
Enzymes [BR:
cill01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
122299413
DNA repair and recombination proteins [BR:
cill03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
122299413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
DUF5393
Tis11B_N
Motif
Other DBs
NCBI-GeneID:
122299413
NCBI-ProteinID:
XP_042965611
LinkDB
All DBs
Position
16:29107918..29112338
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AA seq
381 aa
AA seq
DB search
MSGAPRVRSINVADSEARPVLCPAGNGNKTGSMIARKPGGKPLRKVEKSTGEAPLAEDKK
ACKSPTVTTSSPQLHSVNVPSVLRRHEQLLHSNLSLNASCSSDASTDSFHSRASTGRLIR
SNSVGSRRKPSSSKPRSVASDGGLESLPDGFRTKKRCAWLTPNSDPCYAAFHDEEWGVPV
HDDKKLFELLVLSGALAELTWPAILSKRHIFREVFADFDPVAVSKLNEKKIIAPGTTANS
LLSELKLRAIFENARQIFKVIDEFGSFDQYIWSFVNHKPIVSRFRYPRQVPVKTPKADVI
SKDLVRRGFRSVGPTVIYSFMQAAGITNDHLISCFRFQECIAAAEGKEENGIKDKVEETK
PDNMMESELSVAIDELSFSST
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggagctccaagagtgaggtctataaatgtggctgattcagaggcaaggccggtg
ctctgtcctgccgggaatggaaacaagacaggttcaatgattgcacgaaaacctggtggg
aagccactgaggaaggtggagaaatcaaccggggaggctccgttggccgaagataagaaa
gcttgtaaatcgcccacggttactacttcctctccccagctgcattctgtcaatgtacct
tcagttcttcgccggcacgagcagttgttgcattccaatttgtcgttaaacgcatcatgt
tcgtccgatgcttctaccgattcgtttcatagtcgagcgtctactggcaggttgatacgg
tcgaatagtgtggggagtaggaggaaaccttcttcttcaaagccgagaagtgttgcttct
gatggtggtttggaatctctacctgatggatttcggaccaagaagaggtgtgcgtggttg
actccgaattccgacccatgttatgctgctttccatgatgaagaatggggagttccagta
cacgatgacaagaaattgtttgagctgcttgttctttctggtgctttggctgaacttaca
tggcctgccattttaagcaaaaggcatatctttagggaagtatttgcagattttgatcct
gttgctgtctctaagttgaatgaaaagaagataatagcaccaggaaccactgcaaattct
cttttatccgaactaaagctacgtgctatctttgagaatgcacgtcaaatatttaaggtc
atagatgaatttgggtcatttgaccaatacatctggagctttgtgaaccacaagccaata
gttagcagattccgatatcctcgccaagttccagtgaaaaccccaaaagctgatgtgata
agcaaggacctggtgagacggggattccggagtgtgggccccaccgtcatctactcattt
atgcaggctgcgggaataacaaatgatcatctcattagttgcttcagattccaggagtgt
atagctgctgcagaagggaaggaagagaatggcatcaaggataaggtcgaagagacgaag
cctgataacatgatggagtcagaactatctgttgctatcgatgaattgagtttctcttca
acatga
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