Carya illinoinensis (pecan): 122299696
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Entry
122299696 CDS
T08745
Name
(RefSeq) eukaryotic translation initiation factor 5B-like isoform X1
KO
K03243
translation initiation factor 5B
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
cill03012
]
122299696
Translation factors [BR:
cill03012
]
Eukaryotic type
Initiation factors
eIF-5
122299696
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
GTP_EFTU_D4
GTP_EFTU_D2
MMR_HSR1
ATP_bind_1
Roc
Motif
Other DBs
NCBI-GeneID:
122299696
NCBI-ProteinID:
XP_042966040
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All DBs
Position
16:1660234..1671345
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AA seq
1382 aa
AA seq
DB search
MGRKKPMVRGDEAPAAVSKSKKKEVVIDDDEYTIGVELSEEPEAQDRVAVTGKKKGKKGG
AKALNPKDDEGDDVEKEEDDAPDTMFTGKKKGKSKKGGGNRAFNASGFGLLGEEDDDEDG
RSGLTDEKDSVEDDDEQVVSFSGNKKTKKKKPSKDASMGGSSLFSASAFDAIDDDGDNLD
DNEGEEVDNSLGESKVEDGDDEDEQVIAFTGKKKKSSKAKGGSKGGGGSVFTTSDFNGLD
DGDEKKEEDEDVAPLTFLGKKKKSSKKTVGSSSSFSAVLADEENDEDTSVSEHTRADDDT
VGDEDFSAITFSGKKKSSKKKSSSVFTELGDEAEVRSIDEPEQPSMGTSNVVAEVYKVNK
SEEVKDTSKTKKKKKKGGRTAEEEDDLDKILAELGEAPPMSKPAALPQEEKIEVQPEPVA
LADEKEGEEESVDSAAAKKKKKKKEKEKEKKAAAAAAAATVLEVKDETQDEIITEPTKPK
KNESKSKAADKKVPKHVREMQEAIARRKEAEERKKREEEERLRKEEEERRKQEELERLAE
EAKRRKKEKEKEKLQRKKAEGKLLTTKQKDEARRLEAMKNQFLANAGMLPPSTDTVAQNK
RPKYQNKKQKPTHDKANGGAPDKRVENVEAKEEPPETLAKMDSVDSEKVDEESIDMEDKS
EVAEAVEDNGVEEDDDEDEWDAKSWDDVAVNLSIKSAFADEEVDSEPDPVVKKETKVAIP
TSHNAAPPATAKPMGAAKKTTPSHPITSLNLENKEIQEAELAEKNNRKDESSKKEASRSD
STSKLSEDNLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIR
ERTKELKADAKLKVPGLLVIDTPGHESFTNLRSRGSGLCDIAILVVDIMHGLEPQTIESL
NLLKMRNTEFIVALNKVDRLYGWKTCRNAPIVKAMKQQSKDVQNEFNMRVTQIVTQFKEQ
GLNSELYYKNKEMGETFSIVPTSAISGEGIPDLLLLLIQWSQKTMVEKLTYSNEIQCTVL
EVKVIEGHGTTIDVVLVNGVLHEGDQIVVCGMQGPIVTTIRALLTPHPMKELRVKGTYLH
HKEIKAAMGIKISAQGLEHAIAGTGLYIVGSDDDLEDVKEAAMEDVESVMSRIDKSGEGV
YVQASTLGSLEALLEFLKSPAVNIPVSGIGIGPVHKKDVMKASVMLEKKKEYATILAFDV
KIMKDAEELAESLSVTIFRADIIYHLFDQFKAYIDNLKEEKKKETADDAVFPCVLKILPN
CIFNKKDPIVLGLDVLEGIAKVGTPICIPQRDFIDIGRIASIENNHKPVDIAKKGQKVAI
KIVGTNPEEQQKMFGRHFELEDELVSHISRKSIDVLKANYRDDLSVEEWKLVVTLKRLFK
IQ
NT seq
4149 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgaaagaagccgatggttcgtggggacgaagcccctgctgcggtgtctaagtcg
aagaagaaggaggtcgtcatcgacgacgatgagtacactatcggagttgagctgtccgag
gagccagaggctcaagatagggttgctgtaactgggaagaagaagggtaagaaggggggc
gcgaaagctttgaaccccaaggacgatgagggtgacgatgtcgaaaaggaagaggacgat
gctcctgatacgatgtttactgggaagaagaaagggaagtcgaagaagggcggtgggaat
agagcgtttaacgcttctggattcggtttgttgggagaagaggatgacgatgaggatgga
cgctctggactaactgatgagaaagacagtgtggaagatgatgatgagcaagtggtaagc
ttctcagggaataagaagacgaagaagaagaagccgtccaaggacgccagcatgggtggt
agtagtttgtttagtgcatcggcgtttgatgctattgatgatgatggtgacaatcttgat
gataatgagggggaggaggtggataattctttgggagaaagtaaagttgaggatggcgat
gatgaagatgagcaagtaattgcttttacagggaagaagaagaagtcatccaaagccaaa
ggtggcagcaaaggtggtggtggtagtgtgttcacaacgtctgattttaacgggctggat
gatggggatgaaaagaaagaagaggatgaagatgttgccccgcttactttcttgggtaag
aaaaagaagtcttcaaagaagactgttggtagtagtagttcctttagtgctgtgttggct
gatgaggagaatgatgaagatacttccgtgtctgaacatactagagctgatgatgatact
gtaggggatgaagatttctctgcaatcacattttcgggtaagaaaaagtcttcaaagaaa
aagagtagtagcgtttttactgaactgggagatgaagctgaagttaggagtatagatgaa
cctgaacaaccgagtatgggaactagtaatgtggtagctgaagtgtataaagttaataag
agtgaagaggtaaaggacacttctaaaactaagaagaaaaagaagaagggtggaagaaca
gctgaggaggaggacgatttagataagattcttgcagaactcggtgaggcgcctcctatg
tcaaagccggctgctcttccacaagaagagaaaattgaggttcaacctgaaccagttgct
ctggctgatgagaaggaaggtgaagaagagagtgtggattctgctgcagcaaagaagaag
aagaagaagaaggagaaggaaaaagagaagaaggcagcagcagcagcagctgctgccact
gttttggaggtgaaggatgaaacccaggatgaaataataactgaaccaacaaagccaaag
aagaacgaatctaagagtaaagctgcggacaagaaagtgccaaaacatgttagggaaatg
caagaagcaattgctcggagaaaagaagctgaagagaggaagaagagggaagaagaggaa
aggttgaggaaggaagaagaggagcgacggaagcaagaagaactagagagactagcagaa
gaagctaagcgtagaaagaaggaaaaggaaaaagagaaattgcagagaaaaaaagcggaa
ggtaagcttttgactacgaagcagaaggatgaagcccgaaggttggaagcaatgaagaac
cagttccttgctaatgcagggatgcttcccccatctacagacactgttgcacaaaataaa
cgtcccaaatatcagaacaagaagcaaaaaccaactcacgataaagcaaatggcggtgct
cctgacaagcgggtggaaaatgtagaagcaaaggaagaaccaccagagactctggccaag
atggatagcgtcgattcagagaaagttgatgaggagtccattgacatggaggacaagtct
gaagtggctgaggctgtcgaagataatggagtggaagaagatgatgatgaggatgaatgg
gatgcaaagagctgggatgatgttgcagttaatctttctattaaaagtgcgtttgctgat
gaagaggtcgactctgagcctgacccagtggttaaaaaggagacaaaggttgcaatacca
acttctcacaatgctgcacctcctgcaactgccaaaccaatgggtgctgctaagaaaacc
actccttcccatccaataacatctctgaatcttgagaacaaggaaatacaggaagctgaa
cttgctgaaaaaaataacagaaaagatgaatcctcgaaaaaagaagcttcaaggtctgat
tctacctccaaactgagtgaagataaccttcgttccccaatttgctgcatcatgggccat
gttgatactggtaaaacaaagttgctggattgtatccgaggcactaatgttcaggaaggt
gaagctggaggtatcactcaacaaattggtgcaacatattttcctgctgagaacattcgt
gagagaaccaaggaactgaaagctgatgcaaaactgaaggtcccgggtctattggttatt
gatactcctgggcacgaatcctttactaatttgaggtcacggggttcgggtttatgtgat
attgcaattttggttgtcgacataatgcatggcttggagccacaaacaatagaatcactt
aaccttttgaaaatgaggaatacagaattcattgttgcattgaataaggtggataggctc
tatggatggaaaacatgtcgcaatgcaccaattgtgaaggccatgaaacaacaatctaag
gatgtacaaaatgaattcaatatgagggtcactcagattgtaacccagttcaaggagcaa
ggtctaaatagtgaattgtattataagaataaggaaatgggggaaacttttagcattgta
cctacaagtgctattagtggcgaaggcatcccagatttgttattattattgattcaatgg
agtcagaaaactatggttgagaaacttacatatagcaatgaaattcagtgtacagtgttg
gaagtcaaggtcattgaaggtcatgggacaactattgatgttgttttagtcaatggtgtg
cttcatgaaggagatcaaatagttgtttgtggcatgcagggacctattgtcaccacaatt
cgagctttattgacgccccatccaatgaaggaacttcgagtcaaggggacttatctgcac
cataaggaaatcaaggcagcaatgggtatcaagatctcggcacagggccttgaacatgct
atagctggcactggtctatatattgtaggttcagatgatgatttagaggatgtcaaggaa
gcagctatggaagatgtggagtcagtcatgagcaggattgataagagtggtgagggagtt
tatgtgcaagcgtctaccttaggctccttggaagcactgctcgagttcttaaagtcccca
gctgtaaacattcctgttagtggtataggcataggcccagtacataaaaaggatgtcatg
aaggccagtgtaatgcttgaaaagaaaaaggaatatgctactatcttggcatttgatgta
aaaattatgaaggatgctgaggaacttgcagagtctctaagtgtgacaatttttcgggcc
gatatcatttatcacttgtttgatcaatttaaggcctatattgacaacctcaaggaggaa
aagaagaaggaaactgctgatgatgcggtcttcccatgtgtccttaaaattttacccaac
tgtattttcaacaagaaggatccaattgtattggggcttgatgtccttgaaggcattgca
aaggttgggactccgatttgtattcctcagagggattttattgatatcggacgaattgca
tccattgaaaataatcataaacctgtggatattgcaaagaaagggcagaaggttgcaatt
aagatagttggcaccaatcctgaggaacagcaaaagatgtttggtaggcactttgagctt
gaggatgaacttgtcagccacatctcgaggaagtcaattgatgtacttaaagctaattat
agggatgatctgtctgttgaggagtggaagttggttgtgacattgaagagacttttcaag
atacaatga
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