Carya illinoinensis (pecan): 122299775
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Entry
122299775 CDS
T08745
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
122299775
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cill04040
]
122299775
Ion channels [BR:
cill04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
122299775
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
122299775
NCBI-ProteinID:
XP_042966149
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Position
2:7955292..7961240
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AA seq
711 aa
AA seq
DB search
MDFCRRRTFVRLERSSSFGQKYPRNIRLAFGRVLESFQRGVERVKSLKTKQISTRSVGDR
PKKESGRTWEVFDPQDQFLQTWNKLFVLSCVISVAVDPLFFYIPVMEKNGDTCLDLDKRL
AIIACVIRSAIDAFYAIHILIRFNTAIFLPASRGFGRGGLIEDRMAIAKRYLFTHFIIDI
LSILPLPQVVVFAIAPNLKTEVSLVIKEILKFVIFSQYVPRLWRIYPLYVEVTRTSGILT
ETAWAAAAYNLFLYMLASHVVGAFWYLFAIEQWDACWQERCKNQGQDDCRKYFYCDIDGY
INRSTSLGNLSLPCPFIKPDDIENLTVFNFGIFTDVLRSGVVESRAFLKKFSYCFWWGLR
NLSSLGQNLSTSTYVWEIAFAVFIAIFGLVLFSLLIGNMQKYLQSTTVKVEEMRVRRTDA
EQWMSQRMLPDNLRERVRRYEQYKWQETRGVEEEKLIRNLPKDLRKDIKRHLCLDLLMGV
PMFKNMDQQLWDPLVDRLKPVLYTDKSYIVREGDPVDEMLFIIRGNLATTTTNGGRTGFF
NSADLNAGDFCGEELLTWALDPQTSAPKFPISTRTVQAKTEVEAFALMAEDLKTVASQSR
KLRSKELQQIFRFYSLQWRTWAACFIQSAWRRHCKRKLEMALRDSEYGQQVALANEAGTS
VNLGATIYASRFAANALRTLKRKRAAARPTRAPQRVLQLLPQKPTDPDFTA
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggatttctgcaggagacgtacgtttgtaaggttagagagatcttcgagttttgggcag
aaatatccaagaaacatcagactggcttttggcagagttttggagagttttcagagagga
gttgagagagttaaaagtttaaaaacgaaacaaataagcacccgttctgtaggggatcgg
ccaaaaaaagagtctggtcgtacttgggaagtctttgatccacaggatcaatttctacaa
acatggaacaaactatttgtgctttcttgtgtgatatcagtggctgtggacccattgttc
ttttacatccctgtgatggagaagaatggggacacatgcttagatttagacaagagactg
gcaatcattgcttgtgttattcgatccgccatagatgccttttatgcaattcatatattg
attagattcaatacagcaattttcctcccggcatctcgagggtttggaaggggtgggttg
attgaggatcgtatggctatagcaaaaagatacctattcacacacttcattattgacatt
ctatcaattctcccactgccacaggttgtagttttcgctatcgctcccaatttaaaaact
gaagtttcattggtcattaaggaaatattgaagtttgtaatcttctcccaatatgtgccg
aggctttggcggatctatccactatatgtagaagtaacaagaacatctggcatactgact
gagactgcatgggctgcagctgcttataatctgttcctctacatgcttgcaagtcatgta
gttggtgctttttggtacttgtttgccattgagcaatgggatgcatgctggcaggaacgg
tgcaagaatcagggtcaggatgattgtcgaaaatatttttactgtgatattgacggttat
attaaccgtagtacaagtttgggaaatctaagtctgccttgcccttttatcaagcctgat
gatattgagaatttaactgtcttcaactttggaatttttactgatgttctgaggtctgga
gtggtggaatcaagagcttttctaaagaaattctcctactgcttttggtggggtctgcgt
aatctgagttctcttgggcaaaacctgtcaacaagcacatatgtttgggagatagccttt
gctgttttcatagccatctttggattggtcttgttctcgttacttattggtaatatgcag
aaatatctgcaatccacaacagtgaaagtagaagaaatgagagtgagaaggactgatgca
gaacagtggatgtcccaacgtatgctccctgataacttaagggagcgggtcagacgatat
gaacaatacaaatggcaggaaaccagaggcgtcgaggaagagaaactcattcgtaacctt
cctaaggacctcaggaaggacataaagcgccatctttgcttggatcttctcatgggagtg
cccatgttcaaaaacatggatcagcaactgtgggatccgctggttgatcgtctcaagcca
gtgctttacacagacaagagctacattgttcgtgaaggggatccagtggacgagatgctc
tttatcattcgaggaaacctagccaccacgactaccaatggtggaagaactggtttcttc
aactctgctgatcttaatgctggtgacttttgtggtgaagagcttcttacttgggccttg
gatccccagacctcggcccccaaattccccatctcaactagaacagtgcaagcaaaaaca
gaggttgaagcctttgcgctgatggccgaagacttgaagactgtagcttctcagagtcgg
aaacttcgtagcaaagagctccaacagattttcaggttctactcactacaatggaggaca
tgggcggcatgttttatccaatcagcttggcgccgacactgtaagagaaagcttgagatg
gcattgcgcgactcagaatacggacagcaagttgctttggcaaatgaagctggcacctcg
gttaatcttggtgcaactatttacgcatcaaggttcgctgccaatgcacttcgaaccttg
aaacggaaaagggctgcagcacgccccaccagggcaccacaaagagtgctacagttgctg
ccacagaaacctaccgatcctgatttcactgcttaa
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