Carya illinoinensis (pecan): 122299895
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Entry
122299895 CDS
T08745
Name
(RefSeq) far upstream element-binding protein 1-like isoform X1
KO
K13210
far upstream element-binding protein
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122299895
03041 Spliceosome [BR:
cill03041
]
122299895
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
122299895
Spliceosome [BR:
cill03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
122299895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
KH_NusA_2nd
Motif
Other DBs
NCBI-GeneID:
122299895
NCBI-ProteinID:
XP_042966309
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All DBs
Position
16:4736931..4742837
Genome browser
AA seq
701 aa
AA seq
DB search
MADEAQYSSGSDTAANKRKYEEPTAPSTGSRRPTGFSAPIAPQSPDSGHAPPPSYNNVPP
PVDGLTLAKQRAQEVAARLFNNSGAAAVAGALDAKRPKIDNGASGFDSLDSGFSSVPPDV
KSHALHSAPLAPVSYGFQSSSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMD
ADPNSPTRMVELMGTPEQIAKAEQLINEVLAEVAEAGGSGVVSRRITGQTGSDSFVMKVP
NNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDMSTERTLQIDGTSEQIESAKQLV
FEVISENRVRNPAMAGGYSQQGYQARPPTAWGAPGAPPMQQPGYGYVQPGAYSGPSPQYN
MSQPSYPGYPPQPASGGYPSNWDQSTGAPSQQTSQGSGYDYYSQQQSSQQQQTSGGPAAP
ADNSGFNYTQPPPSSYNQQGQGYPQDGYGGYAPPQSGYGQPPPYDQQQGYTSASSYGNVS
NPTQDGHTPSYGSQGESAQAPPVPPSSVGQAGYTSGQQPSPSSASYPPQGTTQPGYGMPP
TSQTGYGNQPPAQSGYGPGYGPPQAQKPLANPPVYGQATQSPGTHGGYGQPAPVQSGYPH
SQPPSSYAQPDSGPQRAPPSTYGAAAGQPGYGAPPYGAPAVSQPGYGQAPPPYNTYGSAY
SQPPVYSADGNAGGNTRGAYDAAPTPQTTQQSVATKTSPQS
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgaagcgcagtactcgtccggcagtgacactgccgccaacaagcgtaagtac
gaggaaccaacagcgccgtctactggctctcgcaggcccactggattctccgctccgatc
gctcctcagtctcccgactctggccacgcgccgcctccctcatacaacaacgttccgccg
ccagtcgacggtttaacccttgcaaagcagcgcgctcaggaggtcgctgccagactcttc
aacaactctggtgccgcagctgtcgctggtgccctcgacgccaagcgccctaagattgat
aatggcgcttctggattcgattccctagactctggattcagctccgtccccccagatgta
aaatctcatgctctgcactcggctcccttggcaccggtttcatatggcttccagagttcg
agcaagaagattgatattccaaatggtagggttggtgttattattgggaaaggaggagag
acaataaaatatcttcagcttcagtctggagcaaagatccaagtcactcgggatatggat
gcggatcccaattctccgactaggatggtggagctcatgggtactccagaacagattgcc
aaggctgagcagttgataaatgaagttcttgcggaggtggctgaagcaggtggttccggc
gtagtttctcgaagaataactggacagactggttcggactcatttgtaatgaaagtccca
aataacaaggttggtttagtaattggtaagggaggcgaaacaattaaaaatatgcaggcc
aggacaggagctcgaattcaggtgatacctttgcatcttccccctggtgatatgtcgaca
gaaaggacactacagattgatgggaccagcgagcaaattgagtctgctaaacagttagtc
tttgaagttatcagtgagaatcgtgttagaaatccagcaatggctggaggatattctcag
caaggttaccaagcacgacctcctacagcttggggcgcacctggggctcctcccatgcaa
caaccaggttatggctatgtgcagcctggagcatattctggaccatctccccagtacaac
atgtctcagccttcttatcccggctatcctcctcaacctgcatctggtggttatccctcc
aattgggaccagtcaactggtgcaccatctcagcagacttctcagggaagtggttacgat
tattatagtcaacagcagtcttcacagcaacagcaaacctctggtggtcctgcagcacca
gcagataattctggtttcaattacactcagccaccaccatcaagctataatcagcaggga
caaggttatcctcaagatggctatggtgggtatgcaccccctcaatctggatatggtcag
ccaccaccatatgatcagcagcaaggttacacctctgcatccagctatgggaatgtgagt
aacccaacacaagatgggcacactccctcctatgggtcccagggggagtcagcccaggct
ccacctgtaccgccttcttctgtgggccaggcaggatacactagtggtcaacagcctagc
ccaagttctgcaagttatccacctcaaggaacaactcagccaggttatggaatgcctcca
acttcccaaactggctatggaaatcaaccaccggctcagtctggatatgggcctggctat
ggaccacctcaagcccagaaacctcttgccaatcccccagtttatggacaggctactcag
tcacctggcacccatggaggctatggccagcctgcccctgtgcagtcaggatatccccat
tctcaaccaccatcaagttatgcccaaccagactctggtccacaacgtgcaccaccatcc
acttatggtgctgcagctggtcagcctggttatggggctccaccgtatggcgcaccggct
gttagtcagccaggttatggacaggcaccgccaccttacaacacctatggtagtgcttac
tcacagcctccggtgtattctgctgatggaaatgctggggggaacacccgtggggcctat
gatgcagcacctactcctcagaccactcagcagagtgtagccaccaaaacatcaccccag
agttga
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