Carya illinoinensis (pecan): 122300322
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Entry
122300322 CDS
T08745
Name
(RefSeq) pleiotropic drug resistance protein 3-like isoform X1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122300322
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cill02000
]
122300322
Transporters [BR:
cill02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
122300322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
ABC2_membrane_3
AAA_21
AAA_25
AAA_29
RsgA_GTPase
AAA_22
AAA_16
AAA
AAA_33
AAA_18
AAA_30
ABC_trans_N
AAA_23
nSTAND3
AAA_28
NACHT
AAA_17
cobW
T2SSE
AAA_11
Rad17
AAA_5
NTPase_1
RuvB_N
ABC_ATPase
AAA_19
DO-GTPase1
Motif
Other DBs
NCBI-GeneID:
122300322
NCBI-ProteinID:
XP_042966811
LinkDB
All DBs
Position
2:complement(21367513..21385158)
Genome browser
AA seq
1433 aa
AA seq
DB search
MELSTIEGGIQPPFQQTGADCFIEEKDEELQLQWAAIEKLPTFKRLRTSMFGIDHDPGSS
GMEFKGKRTTDVTKLRTVDRHLFIQKLIKHIENDNLRLLQKLRDRIDRVNVKLPTVEVRY
KNLSVEVKCEVVQGKPLPTLWNSLMSQLSVFKKVIRCNSQEANISILKDVSGIIKPSRLT
LLLGPPGSGKTTLLLALAGKLDQSLNVAGEISYNGYKLDEFVPQKSSAYISQYDLHIPEM
TVRETIDFSARCQGVGSRADIMMEVSRKEKAAGIVPDPDVDTYMKAIAVEGQKRNLQTDY
VLKILGLDICSDIMVGDALERGISGGQKKRLTTGEMIVGPTKALFMDEISTGLDSSTTFQ
VVTCLQQLVHITDTTALVSLLQPAPETFDLFDEVILMAEGKIVYHGPRSHVLQFFEDCGF
KCPERKGAADFLQEVISKKDQAQYWYHAGLPYNYVSVDQFSQMFKASDLGQRLNDDLSEP
YDKSKSHRNALSFSIYSLRKWELFKACMSRELLLLKRNSFVYVFKTVQLVITAFIAMTIF
LRTQTTVDLNSANYFLGALYYTLVRLMTNGVAELSLTITRLPVVYKQRSFYLYPAWAYSI
PASILKIPFSLVDSILWTALTYYVIGYSPEVGRFFSQFLLLFALHLASTSMCRFIASIFQ
TMVTASTCGALILMTLFLFGGFIIPKTSLPPWLSWGFWLSPMTYAQIGIALNEFLAPRWQ
KEISKGNTTIGREVLTSHGLNFESYFYWISLGALLGFTILFDAGFVLALTYLPAPKMSRA
IISKKSISQIQEKNGSRSSTQLDNRSTLGTFSKATEETKSSGMLVLPFEPLTIAFKDVQY
FVDMPLEMRKKGFNQKRLQLLRDITGAFRPGILTALMGVSGAGKTTLMDVLSGRKTGGII
EGDIRIGGYPKIQSTFARISGYCEQNDIHSPQITVKESVTYSAWLRLPPEIDPETKARFV
EEVIETIELDDIKDFLVGIPGQSGLSTEQRKRLTIAVELVSNPSIIFMDEPTSGLDARAA
AIVMRAVKNVVATGRTTVCTIHQPSIDVFENFDELILMKIGGQIIYSGMLGHRSSKLIEY
FEGISGVPKIKNNYNPATWMLEFTSASVEAEIGLDFAKIYKESPLYRDTIELVQQLSEPQ
PGSSDLQFPSRFPQSGWVQFIACLWKQHLSYWRSPEYNLARFVFVIAAALVFGAVFWQKG
KEIKTEQDLFNILGSMYSAVIFLGLNNCSSVLPYVETERTVLYREKFAGMYSSKAYTFAQ
MAIEIPYVLLETVFYVAITYPTIGYQWSIYKLFWYFYATFCTLLYFVYLGMLIVSLSTNV
EVASILATAVYTILNLFSGFLMPGPKIPKWWVWCYWICPTSWSLNGLLTSQYGDMNTEIL
IFGELKTISSFIKDYYGFQHDRLGLVAFVLIAYPVIYASLFAYCIGKVNFQSR
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
atggagttgtccaccattgaaggaggcattcaaccaccatttcaacaaactggtgcagat
tgttttatagaggagaaagatgaggaacttcagttgcaatgggctgcaattgagaaatta
cctacatttaaacggctcagaacctcaatgtttggtattgatcacgaccccggaagcagt
ggaatggaatttaaagggaagaggacgacagatgttaccaagcttagaacagttgacaga
catcttttcattcagaagctcataaagcacattgagaatgataatctccggttgctgcag
aaactgagagacaggatagacagggtgaacgtaaagttacccactgtggaggtgagatac
aagaatctgtctgtggaagtcaagtgcgaagtagtccaagggaagcctcttccgacgcta
tggaactctctcatgagtcagttatcagtttttaagaaggtaatacggtgcaattctcag
gaagccaatataagcatcttaaaagatgttagtggcatcattaaaccatcaaggcttaca
cttctgcttggtcccccaggcagtgggaaaacgaccttgttattggctcttgccggaaag
ctagaccaatctttaaatgttgcaggggaaatctcttacaatggttacaaactagatgag
tttgttccacagaaatcatcagcttacataagccaatatgacctgcacatacctgaaatg
actgtgagggaaacaattgacttttcagctcgctgccagggtgttggaagcagagctgat
atcatgatggaagtaagcagaaaagagaaagcagcaggaattgtccccgaccctgacgtg
gacacttatatgaaggcaatagcagttgaaggacaaaaaagaaatctccaaacagactat
gttttgaagatccttggactggatatctgcagtgacataatggttggcgatgcattggaa
agaggcatttcgggtggccagaagaaaaggttaacaacaggggagatgattgttgggccc
acaaaagctctatttatggatgaaatatcgactggattggatagctccacaacctttcag
gttgttacctgtcttcagcaattggtgcacatcactgatacaactgcattggtttcactt
cttcaaccagctcccgaaacatttgatctatttgatgaagtgatactgatggcagaaggg
aaaatagtataccatggtcctcgtagtcatgtacttcaattttttgaggattgtggtttc
aagtgcccagaaagaaaaggtgctgcagacttccttcaggaggtaatctccaagaaggac
caggcacaatactggtaccatgctggccttccctataattatgtctcagtggatcagttc
tctcaaatgttcaaagcaagcgatttaggacagaggttaaatgatgatctctcagagccg
tatgacaaatctaagagccacagaaatgccttgtcgttcagtatttactctttgagaaaa
tgggaattgttcaaagcttgcatgtccagagagctacttctcctgaaacggaactcattt
gtctatgtgttcaagacagtccagcttgtcatcactgcatttattgcaatgaccatattt
ctacgcactcagacgactgtggacttgaacagtgccaattattttttgggcgctctatac
tatacacttgtcagactcatgactaatggagttgcagaactgtccttgacaatcaccaga
ctcccagtggtttacaagcaaagatcattctatctgtatccagcatgggcttattccatt
ccagcatctatactgaaaattccattttctctggttgattccatactttggacagcactg
acttactatgttattgggtatagccctgaagtagggaggttcttttcccagtttcttctg
ctgtttgccctacatctagcatcaacgtctatgtgtcgtttcatcgcctcaattttccag
actatggtgactgcatcaacttgtggtgctttgatcttaatgacacttttcttgtttgga
ggcttcatcattcctaaaacctctttaccaccttggctgagttggggcttctggctttct
cccatgacttatgcgcaaataggcatagcactaaatgaattccttgctccacgatggcaa
aaggagatttcaaagggaaacacgaccatagggagggaggttctaaccagtcatggcttg
aactttgagagctatttctattggatatcattaggggctttgcttgggttcactatactt
tttgatgcaggctttgtcttagccttaacttacttgccagctcctaaaatgtctcgagct
attatttcaaagaaaagcatttctcaaatacaagaaaaaaatggtagcagaagtagcaca
caactggataaccgatcaactctaggtaccttttccaaagctactgaagagacaaaaagt
tctgggatgctggtcctaccatttgagcctctgacaatagcattcaaggatgtgcaatac
ttcgttgatatgcctctggagatgagaaagaaaggtttcaatcagaaaaggcttcagctg
cttcgagatattacaggagcatttaggccaggaattcttacggcacttatgggggtcagt
ggagctgggaaaacgactctcatggatgtcctttctggaaggaaaactggaggtattatt
gaaggggatataagaataggagggtatcccaagatccagagtacatttgcaagaatatca
ggttactgtgagcaaaatgatatacattctcctcagattactgtaaaagaatcagtgaca
tactcagcttggttgcggttgccaccagagattgatccagagacaaaagctagatttgta
gaagaagtcattgaaacaattgaacttgacgatataaaagattttttagttggcattcct
ggccaaagtggcctatctactgaacaacgtaaaaggctaaccattgcagtggagcttgtt
tccaatccatcgattatatttatggatgaacctacatcaggtttagatgcaagagcagct
gcaatcgtaatgcgtgcagtgaagaatgtagttgccactggaaggacaacagtttgcacc
atccaccaaccaagtattgacgtatttgagaattttgatgagttgattctaatgaaaatt
ggaggacagattatctactctggaatgctaggtcaccgttcaagtaaactcattgaatat
tttgagggtatttctggtgtgccaaagataaaaaataattataatccagcaacatggatg
ctagaatttacttcagcttcagtagaagcagaaattggtttagattttgccaaaatctat
aaggagtcacctctgtatcgtgacaccatcgagttagtacaacagctgagtgaaccacag
ccaggatcaagtgacttgcagtttccctctcgttttccacaaagtggctgggtgcagttt
attgcatgcctatggaaacaacacttatcttattggaggagtcctgaatacaacttggca
cgtttcgtgtttgtgattgctgccgcactggtgtttggggcagtcttttggcagaaagga
aaggagataaaaactgagcaggatttgttcaacatacttggatccatgtatagtgctgta
atattcttaggcctaaacaattgttcatcggttctaccatatgtggaaactgagcgcacc
gttctgtaccgggaaaaatttgctggaatgtactcctccaaggcttacacatttgcacag
atggccatcgaaataccttatgtgctgctggaaacagttttctatgtggccattacatat
ccaacaataggttaccaatggtcaatttacaagctcttttggtacttctatgccacattc
tgcactcttctatactttgtgtatcttgggatgctgattgtttcattgagcacaaatgtc
gaagtagcttccattttggcaactgcagtctacaccatattgaaccttttctcaggcttc
ctaatgccaggaccgaaaattccaaagtggtgggtctggtgctattggatttgccctaca
tcttggtccctaaatggcctgctgacttcacaatacggagacatgaatacagagatactg
atctttggggagctcaagacgattagttcttttattaaggattattatggctttcaacat
gatcgtttaggccttgtggcctttgttctcattgcttatccggtcatttatgcttccctg
tttgcctattgcatagggaaagtaaatttccaaagcaggtag
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