Carya illinoinensis (pecan): 122300329
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Entry
122300329 CDS
T08745
Name
(RefSeq) YTH domain-containing protein ECT4-like isoform X1
KO
K20102
YTH domain-containing family protein
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122300329
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122300329
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
DUF1463
Motif
Other DBs
NCBI-GeneID:
122300329
NCBI-ProteinID:
XP_042966827
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All DBs
Position
2:21511404..21517652
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AA seq
702 aa
AA seq
DB search
MEMYNFSEHGNTETYLIQGAESNSHLTSPLHEQIETMYTEGAPEIVVDQGLYYPTATNYG
YYYTGFGSPGDWEDHNRVFGVDGPDIQHTGVQNESSPYVYYTPSYGYTQSPYNPYNPYIP
GAMIGVESQFVGAQQYYTLPPYQNTVSSPAYVPFIVQPDIVPSTSADSYDTGESMNRPEG
RSLKHNSLATGALPRNSVKSISNQSNSLARVSESPRANVGPSKQSAIHGTASAGSFAPPS
SHVLEVRNASGSVPAVDNISNGKVLAHQNQLKVTLPVSHGLSGFGSSAYGQAVGGKIRSK
IHVGRALNDAFGSPEALGEQNRGPRINRSKSQLASKAYTGRAGDGNAQGNIIISIDQYNK
DEFPADYVDAKFFIIKSYSEDDVHKSIKYIVWSSTPHGNKKLDSAYEDAQRVAAGKPRGC
PIFLFFSVNASGQFCGVAEMVGPVDFNKDMAFWQQDKWSGSFPVKWHIIKDVPNTNFRHI
ILENNENKPVTNSRDTQEVMYKKGLEMLKVFKNYMLKTSLLDDFMYYENRQKIMEEEKAR
LLVKSFEVPYFIPSLNPPRRLNGVFELPPREDEKTTKPNDGSNSSTIKTGVSAPEQVSSN
SFVINPSIGDGNDEQIAVETKTDVVSTLKIGSLTINPKQAEPNKPLPAANTEPADIVKVG
SVPIKVNGFAESGFLTVGTIPLDRRPLQLDKGGASVNNGSQR
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgtataatttttctgaacatggaaacacagagacttatctgattcaaggtgct
gaatcaaactcacacttgacaagtccactacatgaacaaattgaaactatgtacaccgaa
ggagctcctgaaattgttgttgatcagggcttgtattatcccactgccaccaactatgga
tactattatacaggatttggatcacctggcgactgggaggaccacaatagggtttttggt
gtagatggtcctgacattcagcacacgggtgtgcaaaatgaaagttcgccttatgtatat
tatacgcctagctatggatatacacagtcgccatacaacccatacaatccttacataccc
ggtgctatgataggtgttgaaagtcaatttgttggggcacagcagtattacactcttccc
ccttatcagaacaccgtttcttcacctgcttatgttccctttattgttcaaccagatatt
gtccctagtacttcagctgactcgtacgatactggtgaatcgatgaatagacctgaagga
agaagtttaaaacacaacagtttggctactggagccttgccaaggaactctgtaaaatct
atttcgaatcagagtaattctttggccagggtatcagaaagcccaagagctaatgttgga
ccaagtaaacaatctgcaatacatgggactgcttctgctggtagttttgcacctccttca
tcacatgttcttgaggtcagaaatgcctctggctcagttccagctgtagataatatctcc
aatggaaaggttctagctcatcaaaaccaattaaaagtaactcttcctgtcagccatggt
ttatctggctttggatcaagtgcttatggacaggctgtagggggtaagattcgttccaaa
atccatgtcggcagagctctgaatgatgcatttggaagcccagaggcattaggtgagcag
aatcggggccctagaattaacagatcaaaaagtcagcttgccagcaaagcatacacagga
agggcaggagatggtaatgcacagggaaatattattatctctattgatcagtataataag
gatgaatttcctgctgattacgtggatgcgaagttcttcataataaaatcttacagcgag
gatgatgtacacaagagcattaaatatattgtttggtcatctacaccccatggaaacaag
aagttggatagtgcttatgaagatgcacagagggtggctgcagggaagcctagaggctgt
cctatcttcctattcttttctgttaatgcaagtggtcaattctgtggtgttgcagagatg
gttggcccagttgacttcaataaggatatggctttttggcagcaagataaatggagtggg
agcttccctgtgaagtggcacattatcaaagatgtcccaaacaccaattttaggcacatt
attttagaaaataatgagaacaaaccagtgactaatagcagagatacacaagaggtaatg
tataagaaaggtctggagatgttgaaagtcttcaaaaattacatgctaaagacctcctta
cttgatgacttcatgtactatgaaaatcgtcagaaaatcatggaggaagagaaagccagg
ttacttgtgaaaagctttgaagttccgtattttataccttcattgaatccccctcgcagg
ctaaatggtgtttttgagctacctcccagagaagatgaaaaaactaccaagcccaacgac
ggttcaaatagctcaacaataaagacgggggtctctgctcccgagcaggtttcttctaat
tcttttgttatcaacccaagtattggagatggaaatgacgagcaaattgcagtcgagaca
aaaactgatgtagtatctactttaaagattggttcacttaccataaacccaaagcaagct
gagcctaataagcccttgccagctgctaatactgaacctgctgatattgtcaaagtaggc
tcagtgcccatcaaagttaacggatttgcagaatctggttttctaacagttgggactatt
ccccttgatcgtaggccactgcagcttgacaaggggggtgcttctgttaacaatggatcc
caacgttaa
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