Carya illinoinensis (pecan): 122300401
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Entry
122300401 CDS
T08745
Name
(RefSeq) pumilio homolog 24
KO
K14844
pumilio homology domain family member 6
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122300401
03009 Ribosome biogenesis [BR:
cill03009
]
122300401
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
122300401
Ribosome biogenesis [BR:
cill03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
122300401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPL
PUF_NOP9
PUF
Motif
Other DBs
NCBI-GeneID:
122300401
NCBI-ProteinID:
XP_042966960
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All DBs
Position
2:23226401..23235470
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AA seq
655 aa
AA seq
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MAAKSHQQSSKTKKRKQVPGANAEAPDRSTYSKKPKLVSPRLSGPKGSNKPFKPLKSKFM
KAEAGEEKKAPMSKRERRLHAKELSEARKKKRKRYYALEHELASLWEKMRCHDIAKEDRS
KFVTEALQKMKGKIPEIAGSHISSRVLQTSVKYCSQSERDAVFEELQPHFLNLACNTYAV
HLVKKMLDNASKKQLAGFISSLHGHVASLLRHMVGSVVVQHAYELANAAQKQELLIELYS
KELQLFQDLVSMKERRLVEVISKLGLQKSSVLRHMTSVIQPILEKGIVDHSIIHRMLIEY
FSIADQSSAADIIQQLSGALLVRMIHTRDGSRIGMLCVKHGSAKERKKIIKGMKDHISKV
AHDQCGSLVLVCILSIVDDTKLITKVVIRELQKILKELVFDKNGRRLLLQLLHPDCSRYF
SPDDLNSLNLSIPSLSAKSESGANSEAKSSMVVESSDEEAKRETEVTVAEGNTSASGDDL
HLVEGGKKDPFLRRQELLVNSGLAEGLIDLCIESAGELLRSNFGKEVLYEVATGGSGGIL
RPTLDDKLNALHEAIASLAATASGESEEEHVLNNFHSSRTIRKLILDCPTFARTLWKKAL
KGKSELWAQGHSCKVICAFLESSDSKVRELAKKELQPLIDGGIIKIPETKQAVSK
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggcggctaagtcccaccagcagagcagcaagaccaaaaagaggaagcaagttcctggt
gctaatgccgaagcaccggaccgctccacctattccaagaagcctaagctcgtctccccg
agactgtcaggtcccaagggctccaacaaaccgttcaaaccactgaaatcgaagttcatg
aaagcggaagccggggaggagaagaaggctccgatgtcgaaacgagagcgtcgcctccat
gccaaggagctgtcagaggctaggaagaagaagaggaaacgatattacgctcttgagcat
gagcttgcatctctgtgggaaaagatgaggtgccacgatattgcgaaagaagacagatcc
aagtttgtgactgaagctctacaaaagatgaagggcaagattcctgaaatcgctgggtcc
catatttcttctcgtgtcctgcagacttctgttaagtactgttcacaatctgaaagggat
gcggtgtttgaagagcttcaaccacattttcttaatcttgcatgcaacacctatgcggtt
catctggtgaagaaaatgttagacaatgcctccaaaaaacagcttgcagggtttatctcc
tccctccatgggcatgtggcttctcttcttcgccacatggttggatctgttgttgttcag
catgcatacgagttagcaaatgcagcacaaaagcaggaattactgattgaattgtattct
aaggagcttcaattgtttcaggacctggtctcaatgaaagagcgcaggttagtggaggta
atctcaaagctgggcctacagaaatcttcagtcttacgacacatgacttcagtgattcaa
ccaattttagagaagggaatagttgaccactctatcatacacaggatgttaattgagtat
ttcagcatagctgatcagtcctctgctgcagatataatccaacagttgtcgggtgcactc
cttgttcgaatgattcataccagggatggatccaggattgggatgctgtgtgtcaagcat
ggaagtgcaaaggaaagaaaaaaaattatcaaaggaatgaaagaccacataagcaaggtt
gctcacgatcagtgtgggagtttggtgcttgtctgcattttatcaatagttgatgataca
aagctaataacaaaggttgtgattcgtgagcttcaaaagattttaaaggagcttgttttt
gataagaatggaaggcgtctgttgctgcagctacttcatccagactgttcacgctatttc
agtcctgatgatctgaattctctcaatttatcaattccttctctcagtgccaagagtgag
tcaggagcaaattctgaagcaaaatcctcaatggttgtagaatctagtgacgaggaggcc
aaacgtgagactgaagtgacagttgccgagggtaatacaagtgcttctggtgatgatctt
caccttgttgagggaggaaaaaaagatcctttcttaagaaggcaagaactgttggtcaat
agtggtcttgccgagggtctaattgatctatgtatcgagagtgcaggagaactccttaga
tcaaattttggcaaagaagtcttatatgaggttgcaaccggaggttctggtggcattctc
cgcccaactttggatgacaagttgaatgcccttcatgaagcaatagcatctcttgcagca
acggcatcaggagaatcagaagaggagcacgttctaaacaatttccattcctcacggacg
attagaaaactcatcttggactgccccacatttgctcgtactttatggaagaaagctctg
aaagggaagagtgagttgtgggcccaaggtcacagttgtaaggtaatttgtgcattcttg
gaatcctctgattctaaagtacgtgaattggctaaaaaagagctgcagcctttgatagat
ggtggcattatcaaaatccctgagaccaagcaggcagtcagcaaatga
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