Carya illinoinensis (pecan): 122300412
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Entry
122300412 CDS
T08745
Name
(RefSeq) Fanconi anemia group I protein
KO
K10895
fanconi anemia group I protein
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
122300412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cill03400
]
122300412
DNA repair and recombination proteins [BR:
cill03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
122300412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCI_S4
FANCI_HD2
FANCI_S2
FANCI_HD1
FANCI_S1
Motif
Other DBs
NCBI-GeneID:
122300412
NCBI-ProteinID:
XP_042966979
LinkDB
All DBs
Position
2:complement(23514541..23520683)
Genome browser
AA seq
1404 aa
AA seq
DB search
MSTAADTVNGTTPPTDADVVLLAQRHAHNSLPLPSWLLSLDFHPTLLSFLRSRSSSPSPS
LAVSEYTVSLLSLISISPHTPSLSSLLSSLLSSYIHLFTSLFIPHDPNSLRTLQFFTSLL
HHVEPTSLIPVIDSILSYLPLINDSDDTQILDLLPTSVDLILNSEEEKLRGGDYANMMFD
RLLDCSWSNSLLLKMVSLVREFSFIDKVRGREFLDKVFVGMKCANLQDLPSLVYQLLVLG
SKGFIKKEVIEGIVMFFGSITGSKTSSIIRQVEGTVLLHLNFAVKQDPSLGQEVMGLVRS
DFRAFNHFTVSVLLSVARVRRLGDSSMCILKTAVLTAYRDYKFTKDCKWLPDDLKEGYLE
NTKVVEKAVLRAVNESSYGREHMVPSILKFAFVLLESVEEGGNKELWNSNDLLGIEDLGI
KMLKTLFEVYDMARNEIIEQCKFRILSLKPEQSMPIMRLLGNLIQTYPCPMLEHVSRLKE
LLDYFTFMHGKVAAYLVTALLPLFKFSHDLQDYTILVMRKAMFRREETVRIAATSGLIDL
ILAEKQSKRDGPLSFQDSSSQASCSQQAEMPCSLGQGLFQELSGLLQRCLYQQAKVKELM
YHGLVKLVLMDPSSAGSIFDFLLPHFLCFFGEDTEVQLKIRSCVKAESGKVAIEEPLDCL
LSCVSWILLLQPPGKTGVSGSAWACLGFSLSQDNEVGRNLSGESFYSAFLKIRKFLTNQN
LEGVLGKIENAGSKHLEEENSKCCALILSGIIEVVLNTIGNEMEKTTEIRKVDLEKEIIG
LLDLHHSLDKYTCTSRQSNGIRKGNLLSAPHDTPNIMDSGHTKVTKGRIPYLSTSSIYQL
LQTALKLYNTDCSNSIGAYQNCSQSSSGNSSKCGSKIISFVLNAFLRNAKSLPVMEKEDP
LMTLIYGDIKMLGPQLLKLIFLLKSLTKSVTDHNKKEAKGKKEVEDQRELFHLAFVCLKE
LIIVSLCSPNLTGMLEDMVSVSTFQCSGSDDECEAATRIDDQHVRGKELFVTKILKPLFS
ELLALTFFGEVEVICDMIFMIGKKLPCKWKNIHGAWAIRVCKSGGIRNSKVAKAVVMLAI
SLSSPPNDLALAQDIAAELLKVAGSEMVDPIEMSELYPLVNHSTSSAISSCVLQLIEAIL
VDMDWATKKLRTFALVTQKNTHPNENGEHASGLAFEESIYSMAEEVMKVLSFFVLMTVKD
TQAEHLLKLAARFYKHLAQMSKLRIAPKGCKQLLPSLKFQKLVELTCKQLTVPLYNFVML
VQKKQQENPSSKGIIRKIKRENRCIPDLIFQIEDYEKYLIRLSKVSKVNLLRHAKRSTSR
DFKILDPKKMISEEDASNHDDPNVVVNELCEVSEDDEGNESEKPLSPKSGNPMAAEDSGS
DGEALHSAKRVKRGRVVHDSDDEA
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atgtccactgctgccgacaccgtcaacggcaccactccaccaacggacgccgatgtagtc
cttttggcccagcgccacgcccataatagtttgcccctcccctcctggctcctctccctc
gacttccaccccactctcctctccttcctccgctctcgctcctcctccccttccccctct
ctcgccgtctccgaatataccgtctccctcctctctctcatctccatctccccccacacc
ccctccctctcctccctcctatcctctctcctctcctcctacatccacctcttcacctcc
ctcttcattccccacgatcccaattccctcagaaccctccaattcttcacatccctcctc
caccacgtagaacccacctccctcatacctgtcatcgactcaattctctcgtatttgcct
cttatcaacgactctgacgatacccagatcctcgatctccttccgacgtctgtagacttg
attcttaattcggaggaggagaaattgcgtggtggggattacgctaacatgatgtttgat
cgtttgcttgattgtagttggtccaatagcttgttgttgaagatggtctcgctagtgagg
gagttttcgtttattgataaggtgagggggagagagtttttggacaaagtgttcgtcgga
atgaagtgcgcaaacttgcaggacttgccttcgcttgtgtaccaattgttggtcttgggg
tccaaggggtttatcaagaaggaggtgatcgaaggcattgtgatgtttttcgggtctata
acggggtcgaagacaagctcgataattaggcaagtggaaggaaccgtgttgcttcatctg
aatttcgcggtgaagcaggacccgtcgttggggcaggaggtgatggggcttgttaggtcg
gattttcgagctttcaatcattttacggtctctgttttgttatcggtggctagggttcga
aggctcggtgacagttcgatgtgcattttaaagactgcggtgctcacagcctatcgagat
tacaagtttaccaaagactgtaaatggctgccagatgatttgaaggaagggtatctagaa
aataccaaagtagtagagaaggctgtgttaagagccgtcaatgagagcagctacggaaga
gagcatatggtgcctagcattttgaagtttgctttcgtgttgcttgaatcagtggaagag
gggggcaataaagagctgtggaattctaatgatctattgggcattgaagaccttggtatt
aagatgctgaaaactctgtttgaggtctatgatatggcaagaaatgagattattgagcaa
tgtaaatttcgcattctctcattgaagcctgagcagagcatgccaatcatgagattgctt
ggtaatcttattcagacttatccttgccccatgttggaacatgtttcccgtctgaaggaa
ttgttagattatttcactttcatgcatggcaaagtcgctgcttaccttgttactgcacta
ttgcctctcttcaaattcagccatgatcttcaggattacaccattctggtcatgcgtaag
gctatgtttagaagagaagagacagttcgtatcgccgcaactagtggccttattgatctt
attctggcagaaaagcaatctaagagagatggcccattgtcttttcaagattcatctagc
caagccagctgcagccagcaagctgagatgccttgcagcctggggcaaggtctctttcaa
gagctgagtggcttgctgcagagatgtctttatcagcaggcgaaggtcaaagaacttatg
tatcatgggcttgtgaagctcgtgttgatggacccatcaagtgcaggttctatctttgat
tttctgctgcctcacttcctttgttttttcggggaggacacagaagttcaacttaaaatt
aggagttgtgttaaagcagagagtggcaaagtcgcaattgaagagcctctagattgcctt
ctatcttgtgtctcttggattctacttcttcagccacccggcaaaactggagtttctgga
tctgcatgggcatgtttgggtttctctctttcacaagataatgaggtgggaaggaatttg
tctggtgagtcattctatagtgctttcttgaagattcgaaagtttctaacaaatcagaat
ttggaaggtgttcttggcaaaattgagaatgctgggtctaaacatcttgaagaagagaac
agcaaatgttgtgctttaatactatcaggaataattgaagtggtgttgaatactattggc
aatgagatggagaaaacaacagagataaggaaggtggatcttgaaaaggagattatcggg
ttacttgaccttcatcattcattggataagtacacgtgtacatcaagacagagtaatggc
atcagaaaagggaatttactaagtgcacctcatgatacacccaatattatggattcaggc
cacacaaaagtgactaaaggaagaattccgtatttgtctacttcaagtatctatcagcta
ttgcaaacagctctaaaactatataataccgactgttccaacagtattggagcttaccag
aattgtagccagtcatcctcaggaaattcatcaaaatgtggctctaagattatttctttt
gtcttgaatgccttccttcgtaatgcaaagtctttgcctgttatggaaaaagaagatccg
ttgatgactttgatctatggggacatcaagatgcttgggccccaattgctgaaattgatt
tttttgctcaagtctctaacgaagtctgtgacagatcacaataaaaaagaagctaaggga
aaaaaagaagttgaggatcaaagggagcttttccatcttgcctttgtctgcttgaaggaa
ctgataatagttagtttgtgtagcccaaatctgactggtatgcttgaagatatggtctct
gtttcgacttttcagtgttctggttctgatgatgaatgtgaagcggctactagaattgat
gatcaacatgtaagaggcaaagaattgtttgttacgaaaatcttgaagccattgttctct
gagcttcttgcacttacattttttggtgaagttgaggttatctgtgatatgatatttatg
attgggaagaaattgccatgcaagtggaagaacattcatggagcttgggctattcgtgtc
tgcaaaagtggtggcataaggaactccaaagttgcaaaagctgttgtcatgcttgctata
tctttaagctcacctccaaacgatctagcattggcccaagacatagctgcagagctgtta
aaagttgctggatctgagatggtcgacccaatagagatgtctgaattataccccctcgta
aaccattctacaagttctgcaataagttcttgtgtactgcagttgattgaagcaattctt
gttgatatggattgggccacaaaaaaactaaggacttttgctttagtcactcagaaaaat
actcatcctaatgaaaatggggaacatgcttctggattggcctttgaggaaagtatttat
tcaatggctgaagaggtgatgaaagtactatcattttttgttttgatgaccgtcaaggac
actcaagcagaacatttgctcaaattggctgcaaggttttacaagcatttagctcagatg
tcaaagctgcggattgctcctaaaggttgcaaacagcttcttcccagcctaaaatttcag
aagcttgtagaacttacttgcaagcagctcacagttcctttatataactttgtgatgctg
gtgcaaaagaaacaacaagaaaatcctagtagtaaggggatcatccgaaaaattaagagg
gagaacagatgcatcccggacctcatctttcagatagaagattatgaaaaatatctcatc
cggcttagcaaggtgagcaaagtcaacttactgaggcatgctaaacgtagcacttctcgg
gatttcaaaattttagatcccaagaagatgatcagtgaagaagatgcttcaaaccatgat
gatccaaatgtggttgtaaatgaattgtgtgaggtttctgaagacgacgaaggaaacgag
tcagagaagccattatcacccaagtctggtaatcctatggctgcagaggattctggctct
gatggagaagctcttcacagcgccaaacgggtgaagagaggtagagtagtacatgactct
gatgatgaagcatag
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