KEGG   Carya illinoinensis (pecan): 122300468
Entry
122300468         CDS       T08745                                 
Name
(RefSeq) uncharacterized protein LOC122300468 isoform X1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
cill  Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:cill00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cill03400]
    122300468
DNA repair and recombination proteins [BR:cill03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    122300468
SSDB
Motif
Pfam: BRCT_2 RTT107_BRCT_5 BRCT ENT
Other DBs
NCBI-GeneID: 122300468
NCBI-ProteinID: XP_042967085
LinkDB
Position
2:24889389..24895957
AA seq 1175 aa
MIFSELNDSEMVSLGKNDGEIKPIKTEPNVNTPDLQTQVLDSQFSPPSFSVDEKLEAEDA
DELKYLQSTLPFDDTVPLEDAFETQEVNLAGETQVLNIGGETQVLDDPDCIEDMGTLILD
DFNTQVASDIEGEGTEETEVFGDDDEQSDDESVRSCNGQSVDSEKIYPSLHDNSNKGFVE
RLDPLPYKDHGTETHLPTATHVVEGSHKPKAGPLRSGFTSVRVASFRASALGIHMALEGI
NKGSFYVTSKNQSWDVGDEVAQEHDVGQCYRKIKGLNDEKMCRVGSRTARKLFTEDSHDD
YRGLPHNSNDVEREGLPQLPSCDDGLAGLSYVNSQEPAEFSQANALDFVDRFLKDNFRDF
EQADHRKKTKGKSNSVPIARGPQSFAKKANDRNMLGEAGIFDWDDSREDEGGGDIFCRMK
EKFFDTGGQGRRSFTQPQKPKGSRLDDYRGHEEHLDFNNKRMSLAHSDSKLMSHRPKVNE
DTVQEMKLKKNLVSELDEQSNDNPCGEQMDTNFRKTGVPEMLDAAFDTQMAAEAMEALFH
GEAIGGIANHDANDAHQGIEKDAKDPCRGSLVGTDSVIHSKKTSCRKRVSLTDVGVASQK
KSKSMIAKLSKELSISLEKHFDNIRKQSGTELGRTKSRRNSIAEEFHTANGVSFPGTCTP
VAHRTRQSLSVNQLKKPENVSSDHREEMNSLMEVCTLVEKSNSSLAILPSKVVKEKSSMT
GFNKSGEINSTKTSQHEQLAPKLIANNNDSKIDALNHPRRRSHRNLSGQENGHDNLDGAL
QPSAQPKYMGKSISKCKRTRGDAKSPFNSNMKRKTRSGNASIYGKSGDMDDKITSKDLIG
AKADKRFDRDTDASCHLCTGKPNARLEESPRDKCKPSASACTTPIPVNCKTSENAASPVC
MGDEYFKLSCKRNLSRLSLLKEIRSLSAAGPEPASVSKDSRKRRDMSAVRVLYSHHLDED
IMKQQKKILARLGVSIASSIMDATHFIADQFVRTRNMLEAIASGKPVVTHLWLESCGQAS
CFIDEKNYILRDAKKEKEFAFSMPVSLARASQHPLLKGRRVLITPNTKPGKEIISNLVKA
VQGQAVERTGRSTLKEDYIPEDFLVLSCEEDYAICAPFLEKGAAVYSSELLLNGIVTQRL
EYERHRLFADKVKRTRSTIWIRKDDNQFLPVTKQK
NT seq 3528 nt   +upstreamnt  +downstreamnt
atgatcttcagtgaattaaatgattcagaaatggtttctcttgggaagaatgatggtgaa
attaaaccaatcaagacggagccaaacgtcaacactcccgatctccagacccaggtcctt
gacagccaattttcacctccttcattttctgtagatgaaaagctcgaagctgaggatgct
gatgagttaaaatatctccaaagcactttgccttttgatgatactgttccccttgaagat
gcatttgaaacccaagaagtgaatctagcgggggaaacccaagtattgaatattggtgga
gaaacccaagtgttggatgatccagattgtattgaagatatgggcaccctgatattagat
gatttcaatactcaagttgcgagtgatattgaaggtgaaggaacagaagaaactgaagtt
tttggtgatgatgacgagcagtctgatgatgaatcagtaagaagctgcaatggtcagtca
gtggacagtgagaagatttacccttctcttcacgataatagtaacaagggatttgtggag
cgacttgatcctttaccatataaagatcatggtacagaaacccatcttccaactgcaaca
catgtggttgaaggcagccacaaaccaaaagctggacctctacggtcagggtttacttca
gttcgtgtagcatcatttcgggcatctgctctgggaattcacatggctttagagggaatc
aacaagggatcattttatgtcacaagtaagaatcagtcttgggatgttggggacgaagta
gctcaggagcatgatgttggacaatgctacagaaaaataaagggattaaatgatgaaaag
atgtgtagggttggtagtagaaccgctagaaaacttttcactgaggattcacatgatgat
tacagaggacttcctcataacagcaatgatgttgaacgagaagggttacctcagttgcct
tcttgtgatgatggattggcaggattaagttatgtgaactctcaagaacctgcagagttt
tcgcaggccaatgcacttgattttgtggacaggttcctgaaagacaatttcagggacttt
gaacaagctgaccatagaaagaaaactaagggaaaatcaaattctgtcccaattgcaagg
gggccacaaagttttgccaagaaagccaatgatagaaacatgcttggagaagcagggatt
tttgactgggatgatagccgtgaggatgaaggtgggggagatatcttctgcagaatgaaa
gaaaaattctttgatactggaggccaggggagaagatcttttacgcaaccccagaagcct
aaaggaagcagactagatgattatagaggccatgaagaacatttagatttcaataataaa
agaatgagtttagctcattcggattctaaattaatgtcccatagaccaaaagtgaatgaa
gatacagtgcaagaaatgaagttgaaaaaaaatcttgttagtgagttggacgaacagtct
aatgacaatccctgtggagaacagatggatactaatttccgcaagacaggtgtgccagaa
atgctagatgcagcttttgatacacaaatggctgctgaagctatggaagccttgttccat
ggtgaggccatcgggggcattgctaaccatgatgctaatgatgcccatcaaggcattgag
aaagatgcaaaggatccttgcagaggttctcttgtaggaacagatagtgtaattcattca
aagaaaacctcttgtcgtaagagggtaagccttactgatgtaggggttgcttcacaaaag
aaatctaagagcatgattgccaaattaagtaaagaattgtcaatttcgttggagaaacat
tttgataatatcaggaagcagagtggaactgaactaggcagaacaaaatcaaggagaaac
tcgattgctgaagagtttcatacagccaatggagttagtttccctggtacttgtacacct
gttgctcatcgaactagacagtcattgagtgtaaatcaattgaaaaagcctgagaatgta
tccagtgaccatagggaagagatgaactctctgatggaggtatgtaccctagtagagaaa
agcaatagtagtctagctatcctgccttcgaaagtggtgaaggaaaaatcttctatgaca
ggttttaataaatctggagaaattaacagcacaaaaacaagtcaacatgagcaattggct
ccaaagttgatagctaataacaatgattctaaaattgatgcattgaaccatcccaggaga
agatctcatcgaaatttgtcaggtcaggaaaatggacatgataacttagatggtgcactt
caaccatctgctcagccaaaatacatggggaaatctatatccaagtgcaaaaggacaagg
ggtgatgctaaaagcccttttaattcaaacatgaagaggaaaacacgatcaggcaatgcc
tctatctacggtaagtctggtgatatggatgataagattacatctaaagatctaattggg
gcaaaggccgataagcgctttgatagagatactgatgcaagttgccacctatgtactgga
aagccaaatgctagattggaagaatcaccaagagacaaatgtaaaccatctgcttcagca
tgtactactcctatcccagttaactgtaagacatctgagaatgctgcatcacctgtttgt
atgggtgatgaatacttcaaactgtcatgcaagcggaacctatcaagactgagccttctg
aaagaaatccgtagcttaagtgctgcagggcctgaacctgcttctgtctcaaaagattca
aggaagaggagagatatgagtgctgttcgagtcttgtacagccaccacttggatgaggat
ataatgaagcagcagaagaagattctggctcgactaggagtttccattgcatcttctatt
atggatgccacacacttcatagcagatcaatttgtgcgaacaaggaatatgttggaggct
attgcttctggaaaaccagtagtgacacatttatggcttgagagctgtggacaagctagc
tgtttcattgatgagaaaaactacatattgagagatgccaagaaggaaaaggaatttgcc
tttagcatgccagtttcattggcacgtgcatcccagcatccacttctgaagggtcgaaga
gttttgattaccccaaatacaaagcctgggaaagaaatcatttcaaatttggttaaagct
gttcagggccaggcggtggagagaactggcagatctactctgaaagaggattatattcca
gaggattttttggttctatcttgtgaagaagattatgcaatctgtgcaccttttcttgaa
aaaggggcagcagtttacagttcagagttgttattgaatggtatagtcactcagaggttg
gagtatgaaaggcatcgcctctttgcagataaggttaaaagaacacgttctacgatatgg
atcagaaaggacgacaatcagttccttcctgtgactaaacaaaaataa

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