Carya illinoinensis (pecan): 122300485
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Entry
122300485 CDS
T08745
Name
(RefSeq) SAC3 family protein B isoform X1
KO
K23719
nuclear mRNA export protein SAC3
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122300485
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
122300485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAC3_GANP
Motif
Other DBs
NCBI-GeneID:
122300485
NCBI-ProteinID:
XP_042967113
LinkDB
All DBs
Position
2:25168391..25185759
Genome browser
AA seq
1526 aa
AA seq
DB search
MYSAYTGFGKASGPNRPPESHVPNFGSFSRPPSDSPSTPPFPTPAPLQSPRAPGTLQRVP
SPPLALESSGPAVSSAYQISLGVRRGPEAALSRPLALESYHSAASLPYLSAGVHRGPEAG
FSRPLALESTHSAAIPPNSSIGVHGQQFLHTDRPASFSTSLDNRPILPGNYANSVAYQNQ
SSVLPYLGSYASERDFLTNREGVQVLKRNRSPPLPSGSEVLQEDSHFSGNGSRRFPTPAI
NLDSEVVATKRTSSPALKRTRSPSSLPSGQLFPENFFSTQDNTEREMEAKAKRLARFKVE
LSQNVQGSPDFADQLDSANRNEESIEERKKYAGNQSAELTEDISHAHVLSDFDGQEPSTI
IIGLCPDMCPESERAERERKGDLDQYERVGGDRNQTSKSLAVKKYTRTAEREASLIRPMP
ILQETIDYLLNLLDQPYDDRFLGIYNFLWDRMRAIRMDLRMQHIFDYGAILMLEQMIRLH
IIAMHELCEHAKGEGFSEGFDAHLNIEQMNKTSVELFQIYDDHRKKGISVATEKEFRGYY
ALLKLDKHPGYKVEAAELSLDLAKMTPEIRQTPEVLFARDVARSCRTGNFIAFFRLARRA
SYLQACLMHAHFAKLRTLALASLHSGLQNNHGLPVSHVAKWLGMEEEDIESLLQYHGFSI
KVFEEPYMMKEGPFLNRDKDYPTKCSELVYLKRSGRIVEDVLPPTQVISLPAEAVSIPSD
ERESSVCTSNEEMADLEAFSSSTDSQQRQPVIISPTLTKQSQNDHQAAGASNPPWGLLLS
HSSPKSQLAKVGIVAKQNFDDLFRNSLERNMHFHKEAMMPQDVSKTAVKERYLDGKKDYE
AEKIGSPRVVINRLEDAEPSDIHKENTCQNDIHKENNISTVLANDHAKETAEAKLKLFLR
LWKRRCAKRREFRKQMQVAANAALDSLSLGPPIQQKKEQPSNFGEFDIDHVMRERHKKHA
ESWSRLNVSDVIAGTLSKRNPDAKCICWKIIVCSQMNNLERVKLEQRSQVALPAAWLLSK
LMPSSKNEDDNDLLMSSPGLSIWTKWVPSRDGAYQTCCLSVVKETEFDILDETVSGASAV
LFLVSEKVPWKHQRVQLQDLLMSIPSGSCLPLLILSCSNKEETSDSFFVVANELDLHNID
KSRISSFRVVPLILNLQKQHADGFFSDDQLREGLKWLASESPLQPALHNLRTRELVLSHL
NSSLEVLERKNDFEVGPSNCISAFNEALDCSLGKINATAIANPIGWPCPEIALLEESSDE
HRSAKWYLPKIGWNSLGKFEPLLCALRDSKLPLFTDDISWLARGSYMGKEIKNQRLMLEN
CLIRYLTQSSKMMRYEEAMKEASIMLQKSARLELHNSSYRIVPNWVMIFRRIFNWRLMNL
SNGTFSMAYVLECHIDPPVAGDVDMLRLEGSLTSPYYTSHPSLDEMIEVGCSPLSLGGGQ
PQPEQLQPLAWMPLHGEVCEAAEDERGIRQDDNLAITTDTSYRLDNTSTEIMVGGEASKE
AENLSKLLEQCDIMQNMLDKELSIYF
NT seq
4581 nt
NT seq
+upstream
nt +downstream
nt
atgtactcggcgtatacgggatttggcaaggcttctggtccaaatcgacctcccgaatcc
cacgtacccaactttggatctttctctcgccccccttctgactctccttctactccaccc
tttcccactcccgcccctctgcaatctcccagggcacctggaactctacagagagtgcca
tcgcctcctttggctttagagagcagcggccctgcagtcagttctgcttaccaaatatct
cttggagttcgtaggggacctgaagctgcattgtcacgcccactagctcttgagagctac
cattctgctgcaagtcttccttatttatctgcaggagtccataggggacctgaagctggg
ttttcacgtccattagctcttgaaagcacccattctgctgcaattcctcctaattcatcc
ataggagtccatgggcaacaattcttgcacactgataggcctgcttcattttcgacttca
ttggataataggcccatattgccaggcaattatgccaactctgtggcttatcaaaaccaa
tcctcagtcttaccttatttaggttcttatgcctctgaaagagactttttaactaatcgt
gagggtgttcaagtcttgaaaagaaacagatccccacctttaccatctggcagtgaagtg
ctgcaggaagattcacatttttctggaaatggctctagaaggtttccaactcctgcaatc
aatcttgattctgaagttgtggcaaccaagcgcaccagctccccagctctcaaaagaaca
aggtcaccttcttcacttcctagtggtcaactctttccagaaaacttcttttcgacccaa
gataatactgaacgagagatggaagccaaggcaaagcgattggcccgtttcaaggttgaa
ttaagtcaaaatgtgcaaggcagtcctgattttgcagaccaactagattctgcaaataga
aatgaagagtctatagaggagaggaaaaaatatgctggaaaccagtctgcagaactgaca
gaggatatctcccatgcccatgttttatctgattttgatggccaggaaccatctactatt
attattggattgtgtccagacatgtgtccagagtcagaaagggcagaacgtgaaagaaag
ggagatctagaccagtatgaacgagtgggtggcgatagaaaccaaaccagcaaatccctt
gctgtaaagaagtatactaggacagctgagagggaggcgagtttgatacgccccatgcca
atcctgcaggaaacaattgattatctgctcaatttgctagatcagccatatgatgacagg
tttcttggcatatataacttcttgtgggataggatgagggcaatccgaatggacctgagg
atgcagcacattttcgactacggggctattcttatgctggagcagatgataagacttcac
ataattgcaatgcatgaattatgtgaacacgccaaaggagaaggcttttctgagggattt
gatgcacacctcaacattgaacagatgaataaaacatcagttgagttgttccaaatctat
gatgatcacagaaagaaaggcataagtgtggcgacagaaaaagagttccgaggttattat
gcacttctcaaactggacaaacatcctggatataaagttgaagctgcagagctctcactt
gaccttgcaaaaatgactccagagataagacagactccagaagtgctatttgcccgtgat
gtggcaaggtcttgcagaacaggtaattttattgccttcttccggcttgcaagaagggct
agttaccttcaagcatgccttatgcatgctcacttcgcaaagctacgcaccctggcactt
gcttctctacactcaggactacagaataaccacggtctccctgtttcccatgttgctaag
tggcttgggatggaggaagaggacattgaaagtctcttacagtatcatgggttctcaata
aaggtatttgaggagccttatatgatgaaggaaggcccatttctcaatcgggataaggac
tatcctaccaagtgttctgaacttgtttatttgaaaaggtcagggaggatagttgaggat
gttttacctccaacacaagtcatatcattaccagctgaagccgtatctatcccttctgat
gaaagggaaagttctgtctgtacaagtaatgaagaaatggctgatcttgaagccttttca
tcctcaactgatagccaacagcggcagccagtaatcatctctccaacacttaccaaacag
agtcaaaatgaccatcaggcagctggagcctctaatccgccttggggtttattgttatcc
cacagttcccctaaatcccagcttgctaaagttggaattgtagcaaaacaaaattttgat
gatcttttcagaaactcccttgaaagaaacatgcattttcacaaggaagcaatgatgccg
caggatgtgtcaaaaacagctgtgaaagagagatacttggatggcaaaaaggattatgag
gcggaaaaaattggctccccaagggtggttattaatcgtttggaagatgcagaaccttca
gatattcataaagaaaatacttgtcaaaatgatattcataaagaaaataatattagcaca
gttctggcaaatgatcatgccaaagaaactgctgaagcaaaactcaagttgttcttaagg
ttatggaagcggcgttgtgcaaagcgaagggagttccgcaaacaaatgcaggtagcagca
aatgctgcattagactcattatcattggggccgccaattcaacagaaaaaggagcaaccg
agcaattttggcgagtttgacattgatcatgttatgcgggagagacataaaaagcatgca
gaatcatggtcaagacttaatgtttcagatgtcatagctggtacactgagcaaaagaaat
ccagatgctaaatgcatatgctggaaaattattgtatgttctcagatgaacaacctggaa
agagttaaattggagcagaggagccaagttgctttgcctgcggcatggttgctttcaaaa
ctcatgccttccagcaaaaatgaagatgataacgatctgttgatgtcatctcctgggctg
tcaatatggaccaaatgggttcctagccgagatggtgcatatcagacctgctgcttgtct
gttgtcaaggaaacagaatttgatattctagatgagacagtatctggtgcaagtgcggta
ttgttccttgtatctgaaaaggtcccatggaagcatcaaagagtccagcttcaggacctt
ctaatgtcaataccttctggttcttgcctgccccttctgattttaagttgctcaaacaag
gaagagacttcagattctttctttgttgtggcaaatgaattggaccttcataatatcgac
aagtcaaggataagtagctttcgggttgttcccctcattttgaaccttcagaagcaacat
gcagatgggttttttagtgacgaccaattaagggaaggactaaaatggctggcaagtgaa
tcacccctgcaacctgccctgcataatttgagaacccgtgaactggttctttctcacttg
aattcttcattggaggtgcttgagagaaagaatgattttgaagtgggtcctagtaattgt
atctctgccttcaatgaagccctggattgttccttgggaaaaatcaatgctactgcaatc
gcaaatcctattggctggccttgtcctgagattgctttgctggaggagtctagtgatgaa
cacagaagtgcgaagtggtacttaccgaaaataggatggaattcactgggaaaatttgaa
ccactgctgtgtgctctaagggactcaaaacttccattgtttactgacgatatatcctgg
ctggccagaggatcttatatgggtaaggagattaagaaccagagattaatgcttgaaaat
tgcttgatcagatacctgacacaatcaagtaagatgatgagatatgaggaggcaatgaag
gaggcatccataatgctacaaaaaagtgctcgcctcgagctgcataactcaagttaccgt
attgttccaaactgggttatgattttccgcagaattttcaattggcggttaatgaattta
tccaatggaaccttctccatggcctatgttttggagtgtcatatagatcctcctgttgcg
ggagatgttgatatgttgaggcttgaagggagtttaacatcaccttattatacgagtcat
ccatcgctggatgaaatgattgaagttggctgcagccccttgtcactgggtgggggtcag
ccacagccagagcagttacaacctcttgcatggatgcccttgcatggtgaggtttgcgag
gctgctgaggatgaaaggggtattagacaggatgacaatttggcgatcaccactgacacg
tcttacagattagacaatactagtactgaaataatggtgggtggcgaagcttccaaggaa
gccgaaaacttaagcaagttactggagcagtgtgatataatgcagaacatgctagacaag
gagttgtctatttatttttaa
DBGET
integrated database retrieval system
