Carya illinoinensis (pecan): 122300499
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Entry
122300499 CDS
T08745
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 33A-like
KO
K27472
mediator of RNA polymerase II transcription subunit 33
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cill03021
]
122300499
Transcription machinery [BR:
cill03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
122300499
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Ortholog
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GFIT
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NCBI-GeneID:
122300499
NCBI-ProteinID:
XP_042967141
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Position
2:25355720..25369367
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AA seq
1324 aa
AA seq
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MVSVHTGIWDSVRELTRVAQRKRSDPLHWALQVCSNLNSAGVALPSVELADVLVSYICWD
NNLPILWKFLEKALVLKIVPPMFVLALLSTRVIPHRQSWPVAYRLYLELLKRHAFTLKFQ
INDLNYRKVMESIDDVLLLSQRFGMTPSEPGILVVQFIFSIVWQLLDATLDDEGLLELTS
DKRSIWATKSQEMQLDYHDNYDEKRAELQERLQNENTVMSVDLIGQFLQNKVISRIIFLA
RRNMPAHWVDFIQRLRLLETNSSALRNSNALTPEALHQLTSDAPTVLSRDYKTTSPQKFH
AVMDFGSLSSSAGPCQGASHSALWLPLDLLLEDVMDGCLVNATSAIEIISGLIKTLQAIN
GTSWHDTFLALWIASLRLVQRERDPIEGPVPRLDTRLCILLSITTLVVADLIEEENAPVD
ETECGSTNQWKDKKVTGKCHNDLVSSLQILGDYQGLLTPPQSVVSAANQAAAKAMFFVSG
INVGSAYFDCIGLKDMPIDCSGNMHHLIVEACIARNLLDTSAYLWPGYVNGQINQIPHSV
PAQAPSWSSFMKGAPLTPLLINALVSTPASSLAELEKIFEIAVKGTDDEKISAATILCGA
SLIRGWNIQEHTIHFIARLLSPPAPPKCCGNGSHLIGYAPMLNVLIVGIASIDCIQIFSL
HGLVPQLACSLMPICEVFGSCVPDVPWVLTNGEEISAHAVFSNAFILLLKLWRFNHPPLE
HGVGETPTVGSQLTPEYLLLLRNSHLISSGNFNKSRNRRRLSAVASLLSPHPVFVDSFPK
LKAWHRQHQACIASTLSGLVHGTPVHKIVDGLLNMMFKKINRGGQSLTSVTSGSSSSSGP
GNEDTSLRPKLPSWDILEAVPFVVDAALTACAHGKLSPRELATGLKDLADFLPASLATIV
SYFSAEVTRGVWKPAFMNGTDWPSPAANLSNVEEQIKKILATTGVDIPSLSAGGSSPSTL
PLPLAAFVSLTITYKIDRASERFLNLAGPALESLAAGCPWPCMPIVASLWTQKAKRWSDF
LVFSASQTVFLHNSDAVVQLLKSCFAATLGLNAIPISSSGGVGALLGHGFGSHFCGGISP
VAPGILYLRVYRSIRDIMFITEEVVSLLMHSVRDIVSSGLPRERLENLRTSKIGMRYRQV
SLAASMTRVKLAAALAASLVWLSGGLSLVQSLIKETLPSWFISVHRSELEEGSEGMVAML
AGYALAYFAVLCGAFAWGVDSTSSASKRRPKILGTHLEFLASALDGKISLGCDWATWRAY
VSGFVTLMVGCTPSWALEVDADVLKRLSNGLRLWNEEELALALLGIGGVGTMGSAAELII
ENDE
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccgtacatactggtatctgggacagcgtgagagagctaaccagagtggcccag
agaaagcgtagcgatcctctgcactgggcgttacaggtatgttcgaatttaaactccgcc
ggagtggctctgccatctgtggagctcgccgacgtgttagtatcgtacatttgctgggac
aacaaccttcctattctctggaagtttctggagaaggcgttggtgctgaagatcgtgccg
cctatgtttgtacttgccctgctctccacgagggtcattccgcatcgacaatcttggccg
gtggcatataggctttatcttgaactccttaagagacatgcctttacccttaaatttcag
ataaatgatctgaattatcggaaggtcatggaatcaatagatgatgttcttcttctttca
cagagatttggcatgaccccgagtgaacctgggattcttgtggttcagtttatcttttca
attgtgtggcagctgcttgatgcaacattagatgatgaagggttgctagaacttacatca
gataagaggtccatatgggcaactaaatctcaagaaatgcaattagattaccatgataat
tacgatgagaagagggctgaacttcaggagagactgcagaatgaaaatactgtgatgtcc
gtcgatttaatagggcaatttctgcaaaataaagtaatttcgagaataattttcttggct
cgtcggaacatgcctgcccattgggtcgatttcatccagcgattacggttacttgaaaca
aattcatcagcactaagaaattcaaatgcactaactcctgaggctcttcatcagttgact
tcagatgcaccaacagtcttgtctcgggattacaaaacaacttcaccacaaaagttccac
gctgtcatggattttggttctctatcttcctcagctggtccatgccaaggagctagccat
tctgctctttggcttccgcttgatcttttattggaagatgtcatggatggatgtctagtt
aatgcaacaagtgctattgaaataattagtggtttgattaaaacccttcaagcaataaat
ggcacgtcctggcatgatacttttttagctctttggatagcatctcttcgtcttgttcag
agggaaagggatcccattgagggccctgtgcctcgccttgatactcgattatgcattctg
ttgtctatcacaacacttgtggttgctgatctaattgaggaggaaaatgcaccagttgat
gaaacagaatgcggctctactaatcaatggaaagacaaaaaggttacagggaagtgccac
aatgatttggtctctagcctacagatacttggggactatcagggcttgctgactccaccc
caatctgttgtttctgcagccaatcaggcagctgcaaaggcaatgttttttgtttcaggc
atcaatgtggggagtgcatactttgattgcattgggttaaaagatatgcctatcgactgt
tctggaaacatgcaccatttgatagttgaggcttgtattgccagaaatctactagacacc
tctgcatatctctggccaggctatgtgaatggacaaatcaatcaaatacctcatagtgtg
cctgctcaagcacctagttggtcatcatttatgaagggcgctccactcactcccttgttg
ataaatgccttggtttcaactcctgcttcaagcttggcagagctcgagaaaatatttgag
attgcagtcaaaggaacagatgatgagaagatatctgctgctacaatactttgtggggcc
tccttaattcggggttggaatatacaggaacacaccattcatttcattgctagattattg
tctcccccagctcctccaaaatgttgtgggaatggcagccatttgatcggttacgctcca
atgctgaatgtactaattgttggaatagcatctattgattgtattcagattttctctcta
catggcttggttccgcaacttgcatgttcactgatgccaatctgtgaggtgtttggttca
tgtgtgcctgacgtcccatgggttcttacaaatggggaagaaatttctgctcatgctgtg
ttttcaaatgcatttattcttcttttgaagctatggaggttcaatcatcctcctcttgaa
catggagtaggagagacacccacagttggatcccaactaactcctgaatacctcctatta
ttacgaaactcacacctaatatcttctggaaatttcaataagagtcggaacaggagaagg
ctctcagcagttgcaagtttgttatctccacatcctgtatttgtggactcatttccgaaa
ttaaaagcgtggcatcggcagcatcaagcatgtatagcttcaaccctctctggtcttgtt
catggaaccccagttcataagattgttgatgggcttcttaatatgatgttcaagaagatt
aatagaggaggccaatccttaacttctgttacatcaggaagtagtagttcttctggacct
ggaaatgaagatacctctttaagacctaaattaccttcctgggatattctggaggctgtt
ccctttgtggttgatgctgctttaactgcctgtgctcatggaaaactttctcctcgtgaa
ctggccacaggtcttaaagatttagctgattttcttcctgcatctttggcaaccattgtg
agctacttctctgctgaagtaactagaggtgtttggaaaccagcttttatgaatggaaca
gattggcccagtcctgctgcaaatctttctaatgttgaggaacagattaaaaaaatattg
gctactactggtgttgatatcccaagtctttccgcaggtggaagctctccatctacactt
ccactgcctctggctgcctttgtaagccttactataacttacaaaattgacagagcgtcg
gaacgttttctaaatctggctggcccagccttggagtcccttgcagcaggttgtccatgg
ccttgcatgccaatcgtggcttctctgtggacacaaaaggcaaagcgctggagtgacttc
cttgtcttttctgcctctcaaactgtctttctccataacagtgatgcagtggttcagcta
cttaaaagctgcttcgctgcaacactcggtctgaatgctattcccatctcaagcagcggt
ggggttggagcacttcttggccatggatttggatcccatttctgcggtgggatttctcca
gttgcccctggtatcctttatctgcgagtttatcgatccattagagatatcatgttcata
acagaagaggttgtttcgctcttgatgcattctgtcagagatattgtatccagtgggctt
cctagagagagattagagaatttgaggacaagcaagattggaatgcgatacagacaagtt
tcacttgctgcatcaatgactcgggtgaaactggcagctgcccttgcggcttctttagta
tggttatcaggtggcttaagtctagttcaatctttaataaaagaaacgttgccatcttgg
tttatatctgttcacagatctgagctggaagaaggatcagaagggatggtagcaatgctt
gcgggatatgctcttgcttactttgccgtgctttgtggagcttttgcttggggtgttgac
tcaacgtcatctgcatcaaaacgccggccaaaaatccttgggacccatttggaatttctg
gctagtgcacttgatgggaaaatatcacttggttgtgattgggctacgtggcgtgcttat
gtctcaggatttgtgaccttaatggtgggttgcactccaagttgggcgctggaggtagat
gcagatgtgttgaagagactaagtaatgggctgagactgtggaatgaggaggagcttgct
ttggctttgctggggattggtggggttggtacaatgggctcggctgctgaactgataata
gaaaatgatgagtaa
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