Carya illinoinensis (pecan): 122300542
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Entry
122300542 CDS
T08745
Name
(RefSeq) long chain acyl-CoA synthetase 6, peroxisomal-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00061
Fatty acid biosynthesis
cill00071
Fatty acid degradation
cill01100
Metabolic pathways
cill01212
Fatty acid metabolism
cill04146
Peroxisome
Module
cill_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
122300542
00071 Fatty acid degradation
122300542
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
122300542
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cill01004
]
122300542
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cill04147
]
122300542
Enzymes [BR:
cill01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
122300542
Lipid biosynthesis proteins [BR:
cill01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
122300542
Exosome [BR:
cill04147
]
Exosomal proteins
Exosomal proteins of breast milk
122300542
Exosomal proteins of breast cancer cells
122300542
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
122300542
NCBI-ProteinID:
XP_042967216
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Position
2:26002513..26013306
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AA seq
695 aa
AA seq
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MDSAAAQRRLNAIHGHLLADGDSHPQLRPHPTAGEFALEQGYSVVLPEKLQLGKWNVYRS
ARSPLKLVSRFQDHPEIGTLHDNFVHSVDTFRDYKYLGTRIRVDGTVGEYKWMTYGEAGT
ARSAIGSGLIYHGISKGSCIGLYFINRPEWLIVDHACSAYSYISIPLYDTLGPDAVKYIV
NHAAVQVIFCVPQTLNSLLSFLFDIPTIRLIVVIGGIDDQIPKLPSSTGVEVVTYSKLLS
QGHSNLQPFCPPKTDDIATICYTSGTTGTPKGAVLTHGNLIANVAGTSLINKFYPSDVYI
SYLPLAHIYERANQVSMAYHGVAVGFYQGDNMKLMDDMAALRPTLFCSVPRLYNRIYAGI
INAVQTSGGLRERLFNAAYNAKKQAILSGKNPSPMWDKLVFNKIKGKLGGRVRFMASGAS
PLSPDVMDFLKICFGGQITEGYGMTETSCVISGIEEGDNLSGHVGAPNPACEIKLVDVPE
MNYTSDDKPHPRGEICVRGPIIFKCYYKDEVQTKEVIDEDGWLHTGDIGLWLPGGRLKII
DRKKNIFKLAQGEYIAPEKIENVYAKCKFISQCFVYGDSLNSALVAVVSVDQDILKAWAT
SEGVKYQDLGKLCNDPRARAAVLADMDAIGREAQLRGFEFAKAVTLVLEPFTLENGLLTP
TFKVKRPLAKEYFGKAISEMYAELSASDPSQKSLK
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggattcggccgcggctcagcgtcgtcttaatgccattcatggccatctcctcgctgac
ggcgactctcatcctcagctccgtccccatcctaccgccggcgagttcgctcttgagcaa
gggtacagtgttgtgcttccggagaaattgcagttagggaagtggaatgtatacagatcg
gcacgttctcctttgaagcttgtgagtagattccaagatcatccagaaattggtacactt
catgataattttgtgcattcagttgacacttttcgagattacaagtatctgggaacacga
attcgggttgatggcacagttggagagtacaaatggatgacatatggagaagcgggtact
gctcgatcagctataggttctggcctaatttatcatgggatatcaaagggatcgtgcatt
gggttatacttcatcaacagacccgagtggctcattgttgaccatgcttgctctgcatat
tcttacatatcaattcctttatacgacactcttggtccagatgctgtcaagtatattgta
aatcatgctgccgtgcaagttatattttgtgtgcctcaaaccttgaattctttgttgagc
ttcttgtttgatattccaacaattcgcctaattgtggtcattggaggaatagatgatcaa
attccaaagcttccgtcgtcaacaggagttgaggttgtgacatattcaaaattgcttagt
cagggccacagtaaccttcagcctttttgccctccaaaaactgatgacattgctaccatt
tgctacacaagtggtactactgggaccccaaagggagctgttttgacacatggaaacttg
attgcaaatgttgctggaacctcccttattaacaaattctacccctcagatgtttacata
tcttaccttcctttggcacacatatatgaacgagctaaccaggtgtcgatggcatatcat
ggagttgctgttggattttaccagggggataatatgaaactaatggatgatatggctgct
ctaagacctactctcttctgcagtgttcctagactttataatagaatatatgctggtatt
ataaatgctgtacagacatccggtgggctgcgggagaggttgtttaatgctgcatacaat
gctaagaagcaagcaatattgagcggaaagaatccatcccccatgtgggacaaattggta
ttcaataagataaagggaaagcttggaggacgagttcgtttcatggcatcaggtgcctca
ccgttgtctcctgatgtcatggactttctaaagatctgctttggtggccaaataactgaa
ggatatggtatgactgaaacttcttgtgttataagtggtattgaagagggtgacaatcta
tctggccatgtcggtgcccctaatccagcttgtgaaataaagcttgtagatgtcccagaa
atgaactatacatctgatgataagccacatcctcgtggtgaaatctgtgttcggggtccc
attattttcaaatgttattacaaagatgaagtacagacgaaagaagtcattgatgaagat
ggatggcttcataccggagacatagggctgtggttacctggtggtcgtttaaaaatcatt
gataggaagaaaaacattttcaagctggcacagggagagtacatagctccagaaaaaatt
gagaatgtatatgcaaagtgcaagttcatttcccagtgctttgtatatggtgacagcctg
aattccgctttggtagctgttgtctcggtggaccaagatattttaaaagcatgggctact
tctgaaggcgttaagtatcaagatctagggaagctgtgtaatgatccaagggcaagggct
gccgtcttggctgacatggatgctattgggagggaagctcagctgagaggttttgaattt
gcaaaagctgtgaccttggtgcttgaaccgtttacgctggagaatggcctgcttactcca
acatttaaggtcaagagacctctagcaaaggaatactttggaaaagcaatatctgaaatg
tatgccgagctctcagcctcggacccctcccagaaatcactgaagtag
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