KEGG   Carya illinoinensis (pecan): 122300561
Entry
122300561         CDS       T08745                                 
Name
(RefSeq) SART-1 family protein DOT2 isoform X1
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cill00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122300561
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cill03041]
    122300561
   04121 Ubiquitin system [BR:cill04121]
    122300561
Spliceosome [BR:cill03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    122300561
Ubiquitin system [BR:cill04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    122300561
SSDB
Motif
Pfam: SART-1
Other DBs
NCBI-GeneID: 122300561
NCBI-ProteinID: XP_042967244
LinkDB
Position
2
AA seq 930 aa
MDMEWRDNQDDSPVREHWDGGAYDDFEQNGTDKSSKHRSKDRKKSSRGEDKEHRSKDRER
SKRISDDVSKEREKSARDAEKDRVSSRDRRKEDRDEWEKDRSRDIKVREKDYERERYKEK
ERDRDKDGKDRGKDREKEKERERETDKDSDRGREKERAKEKNRVEREKERDRVREKEREK
ERERHKDREKDRESFKDAEREKGKDKNREKEREADQDKERSRDRERMSRKTPEEDYNWSK
DEEPKMDYEENKVRDASKQGKVFHHSEIEENAEGHLSASELEERILKKREERLNKKSEGV
SEILSWVSRSRKLEDKRNAEKEKAFQLSKVFEEQDNIGQGDSDDEEPGQRTAHDLAGVKV
LHGLDKVMEGGAVVLTLKDQSILADGDINEDTDMLENIELGEQKRRDEAYKAAKKKTGIY
DDKFNDEPGAEKKMLPQYDDPTADEGVALDERGHFSGEAEKKLQELRRRIEGSSTNNHFE
DLNSAGKISSDYFTQEEMLQFKKPKKKKSLRKKEKLDLDALEAEALSAGLGVGDLGPRKD
ARRQATREEQERAEAELRNNAYQSAYVKADQASRSLRLEQTLPVKVEEDENPVFADDDED
LYKSLERARKMALKKQEAEVASGPQAIALLATTNTSRETAEDQNPTTGESQENKVVFTEM
EEFVWGLQLDEEARKPENEDVFMQEDEEPKVSEEEIKDEAGGWTEVNDVSKDEEPADEDK
EETVPDETIHEVAVGKGLSGALKLLKDRGTLKESIDWGGRNMDKKKSKLVGIVDDDEAKD
TRSSTLVDYKKEIRIERTDEFGRIMTPKEAFRMISHKFHGKGPGKMKQEKRMKQYHEELK
LKQMKNSDTPSMSVERMREAQMQLKTPYLVLSGHVKPGQTSDHRSGFATVEKDLPGGLTP
MLGDRKVEHFLGIKRKAEPANSGAAKKFKP
NT seq 2793 nt   +upstreamnt  +downstreamnt
atggacatggaatggagggataatcaagatgattctccagtgagagaacactgggatgga
ggagcttatgatgattttgaacagaatggaactgataaatcaagcaagcaccggagcaaa
gataggaagaagagtagccgaggggaagacaaggaacataggagtaaagaccgagaacgg
tcaaagagaattagtgatgatgtttcaaaggaaagggaaaaatcagccagagatgcagag
aaggatcgagtgtcaagcagggataggaggaaagaagatagggatgagtgggagaaggat
aggagcagagatattaaggtgagggagaaagactatgaacgtgaaagatataaagaaaaa
gagcgtgatagggataaagatggaaaagatcgagggaaggaccgtgagaaggagaaggag
agggaaagagagacagataaggacagtgatcgaggacgtgaaaaggagagagctaaagag
aagaacagggtggaaagagaaaaggagagagatagggtgagggaaaaggaaagggagaag
gaaagagaaagacataaagatcgggagaaggatagagaaagctttaaggatgcagagagg
gagaagggaaaagataaaaacagggagaaggagagggaggcagatcaagataaagagagg
tcaagagatagagaaagaatgagcaggaaaactccagaggaagattacaattggagcaag
gatgaagagcctaaaatggactatgaagaaaataaggttagggatgcttcaaagcaaggg
aaggtgttccaccacagtgagattgaagaaaatgctgagggtcacctgtctgcatcagag
cttgaggagcgcatcttgaagaagagagaagagagattgaataaaaaatctgaaggtgtt
tctgagattttatcttgggtgagtcggagtcgtaagcttgaggacaaaaggaatgctgaa
aaggagaaggccttccagctctctaaggtctttgaggagcaggacaatattggtcaagga
gacagtgatgatgaagaaccaggccagcgtactgctcatgatctggcaggagttaaagtt
ctccatggccttgacaaagtaatggaaggtggggcagttgtcttaacgctcaaagatcag
agtatacttgcagatggggacatcaatgaagacaccgatatgcttgagaatattgaactt
ggagagcaaaaacggcgggatgaggcatacaaggccgcaaagaagaaaacagggatctat
gatgataagtttaatgatgaacctggagcagagaagaaaatgctgccacagtatgatgat
cccactgcagatgagggagtagctctggatgaaagaggacatttctctggtgaagcagag
aagaagctccaagagctccgtaggaggatagagggttcttccacaaataatcactttgaa
gatctcaactcagctgggaagatctcatcagattactttactcaagaagaaatgcttcaa
tttaaaaagcctaagaaaaagaaatccttgcgaaagaaagagaagctggatttagatgcc
cttgaagcagaggctctatctgctggtttgggtgttggggatcttggtccccggaaggat
gcaaggaggcaagccacaagagaggagcaagaacgagctgaggctgaattgagaaacaat
gcataccagtcagcctatgtgaaagctgatcaggcatcgcgatcactgcggttggaacaa
actcttcctgttaaagtagaggaggatgaaaatccagtttttgcagatgacgatgaggat
ctttataaatctttagaaagagcaaggaaaatggcgcttaaaaagcaagaggcagaggtg
gcatctggtcctcaagcaattgcacttcttgccaccactaacaccagcagagaaactgct
gaagatcaaaacccaactactggagagtcacaagaaaacaaggtcgtctttacagaaatg
gaggagtttgtctggggtctccagcttgatgaagaagcccgaaagcctgaaaatgaagat
gtttttatgcaagaagatgaagagccaaaagtttctgaggaagaaataaaagatgaagct
ggtggatggactgaagttaatgatgtcagtaaagatgaggagcctgctgatgaggacaag
gaggagactgtgccagatgaaaccatacatgaagttgcagttgggaaaggattatcaggt
gcactgaagcttcttaaagatcgaggaacactgaaagaaagtattgattggggtggtaga
aatatggacaagaaaaaaagcaaacttgttggcattgttgatgatgatgaagcaaaagac
actcgttcatccactttggttgattataagaaggagattcgaattgagaggacagatgaa
tttgggcgaattatgactccaaaggaagcctttcggatgatttcacataagtttcatggg
aagggacctggcaaaatgaagcaagaaaagcgcatgaagcaataccatgaagaattgaaa
ttgaagcagatgaagaattcagatacaccatcaatgtctgtggagaggatgagggaagct
caaatgcagttaaagacaccctatcttgtccttagtggtcatgttaaaccagggcaaact
agtgatcatagaagtggttttgctactgttgagaaggatctacctgggggcttgacgccc
atgcttggcgatagaaaggttgaacatttcttgggtataaagcgtaaagctgagccagca
aattcaggtgcggcaaagaagtttaaaccttga

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